Endogenous spacing enables co-processing of microRNAs and efficient combinatorial RNAi Journal Article


Authors: Amen, A. M.; Loughran, R. M.; Huang, C. H.; Lew, R. J.; Ravi, A.; Guan, Y.; Schatoff, E. M.; Dow, L. E.; Emerling, B. M.; Fellmann, C.
Article Title: Endogenous spacing enables co-processing of microRNAs and efficient combinatorial RNAi
Abstract: We present Multi-miR, a microRNA-embedded shRNA system modeled after endogenous microRNA clusters that enables simultaneous expression of up to three or four short hairpin RNAs (shRNAs) from a single promoter without loss of activity, enabling robust combinatorial RNA interference (RNAi). We further developed complementary all-in-one vectors that are over one log-scale more sensitive to doxycycline-mediated activation in vitro than previous methods and resistant to shRNA inactivation in vivo. We demonstrate the utility of this system for intracranial expression of shRNAs in a glioblastoma model. Additionally, we leverage this platform to target the redundant RAF signaling node in a mouse model of KRAS-mutant cancer and show that robust combinatorial synthetic lethality efficiently abolishes tumor growth. © 2022 The Author(s)
Keywords: microrna; rna interference; cancer modeling; rnai; gene regulation; viral vectors; target discovery; combinatorial target inhibition; target validation
Journal Title: Cell Reports Methods
Volume: 2
Issue: 7
ISSN: 2667-2375
Publisher: Cell Press  
Date Published: 2022-07-18
Start Page: 100239
Language: English
DOI: 10.1016/j.crmeth.2022.100239
PROVIDER: scopus
PMCID: PMC9308131
PUBMED: 35880017
DOI/URL:
Notes: Article -- Export Date: 1 August 2022 -- Source: Scopus
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  1. Chun-Hao   Huang
    24 Huang