A novel gene constitutively expressed in human lymphoid cells is inducible with interferon-γ in myeloid cells Journal Article


Authors: Trapani, J. A.; Browne, K. A.; Dawson, M. J.; Ramsay, R. G.; Eddy, R. L.; Shows, T. B.; White, P. C.; Dupont, B.
Article Title: A novel gene constitutively expressed in human lymphoid cells is inducible with interferon-γ in myeloid cells
Abstract: A cluster of at lest six interferon-γ (IFNγ)-inducible genes designated Ifi201-204 and located on mouse chromosome 1 has recently been described. Here, we report a human IFN-γ-inducible gene, IFI 16, which has nucleotide sequence similarity with portions of two of the mouse genes, Ifi202 and Ifi204. A full-length cDNA clone derived from IFI 16 [2.709 kilobases (kb)] contained a single open reading frame of 2.187 kb which encoded a putative polypeptide of 729 amino acids and a predicted non-glycosylated Mr of 80020. IFI 16 mRNA was found to be constitutively expressed in lymphoid cells and in cell lines of both the T and B lineages. By contrast, the mRNA was not expresed by the cell lines HL-60, U937, and K562, which represent early stages of myeloid development, but was strongly inducible in HL-60 and U937 with IFN-γ. The IFI 16 protein demonstrated a putative domain structure with patchy similarity to the proteins expressed from gene Ifi202 and Ifi204. The mouse and human proteins each contain two analogous ≈200 amino acid domains which are imperfect copies, but IFI 16 demonstrated additional unique regions, including a Lys-rich N-terminal portion and a "spacer" region between the reiterated domains, analogous to spacer regions in the CD5 and CD8α molecules. Using a panel of inter-species somatic cell hybrid cell lines, IFI 16 was localized to the chromosomal region 1q12→1qter, a region systenic between mouse an man. DNA blotting indicated that, in contrast to the mouse, IFI 16 is present as a single copy gene in the human genome. The authors are pleased to make the cDNA clones described in this paper available to interested investigators. © 1992 Springer-Verlag.
Keywords: human cell; proteins; bone marrow cells; gene expression; bone marrow; gene expression regulation; dna; amino acid sequence; molecular sequence data; gamma interferon; cell culture; messenger rna; rna, messenger; nucleotide sequence; base sequence; gene induction; bone marrow cell; nucleic acid hybridization; sequence homology; lymphocytes; chromosome 1q; complementary dna; chromosomal localization; chromosome mapping; multigene family; northern blotting; southern blotting; open reading frame; lymphoid cell; interferon type ii; human; priority journal; article; support, non-u.s. gov't; support, u.s. gov't, p.h.s.; bone marrow culture; lymphoid cell line
Journal Title: Immunogenetics
Volume: 36
Issue: 6
ISSN: 0093-7711
Publisher: Springer  
Date Published: 1992-09-01
Start Page: 369
End Page: 376
Language: English
DOI: 10.1007/bf00218044
PUBMED: 1526658
PROVIDER: scopus
DOI/URL:
Notes: Article -- Export Date: 30 July 2019 -- Source: Scopus
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  1. Bo Dupont
    264 Dupont