Search Within

Emek Demir

Formats
  1. Journal Article (27)
Groups
  1. Sloan Kettering Institute Faculty (9)
  2. Computational Biology Program Faculty (8)
  3. Epidemiology and Biostatistics (7)
  4. GSK Faculty (7)
  5. Human Oncology and Pathogenesis Program (7)
  6. Center for Molecular Imaging and Biotechnology (CMIB) (6)

More Groups

People
  1. Chris Sander (16)
  2. Ozgun Babur (12)
  3. Bulent Aksoy (9)
  4. Nikolaus Schultz (6)
  5. Selcuk Sumer (4)
  6. Augustin Luna (3)

More People

Years
  1. 2019 (1)
  2. 2016 (2)
  3. 2015 (7)
  4. 2014 (3)
  5. 2013 (2)
  6. 2012 (1)

More Years

Publications
  1. Bioinformatics (7)
  2. Journal of Integrative Bioinformatics (3)
  3. Nature Biotechnology (2)
  4. Nucleic Acids Research (2)
  5. PLoS ONE (2)
  6. BMC Bioinformatics (1)

More Publications

Publishers
  1. Oxford University Press (9)
  2. Biomed Central Ltd (3)
  3. Imbio E V (3)
  4. Nature Publishing Group (3)
  5. Public Library of Science (3)
  6. Academic Press Inc., Elsevier Science (1)

More Publishers

Results (27)

Export to EndNote / Excel | PubMed

Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • Integrating biological pathways and genomic profiles with ChiBE 2
    Journal Article

    Babur, O.; Dogrusoz, U.; Çakır, M.; Aksoy, B. A.; Schultz, N.; Sander, C.; Demir, E.
    BMC Genomics (2014)

    Fulltext@MSK | Save
  • Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles
    Journal Article

    Aksoy, B. A.; Demir, E.; Babur, Ö; Wang, W.; Jing, X.; Schultz, N.; Sander, C.
    Bioinformatics (2014)

    Fulltext@MSK | Save
  • Pattern search in biopax models
    Journal Article

    Babur, Ö; Aksoy, B. A.; Rodchenkov, I.; Sümer, S. O.; Sander, C.; Demir, E.
    Bioinformatics (2014)

    Fulltext@MSK | Save
  • The BioPAX validator
    Journal Article

    Rodchenkov, I.; Demir, E.; Sander, C.; Bader, G. D.
    Bioinformatics (2013)

    Fulltext@MSK | Save
  • Using Biological Pathway Data with Paxtools
    Journal Article

    Demir, E.; Babur, O.; Rodchenkov, I.; Aksoy, B. A.; Fukuda, K. I.; Gross, B.; Sümer, O. S.; Bader, G. D.; Sander, C.
    PLoS Computational Biology (2013)

    Fulltext@MSK | Save
  • Software support for SBGN maps: SBGN-ML and LibSBGN
    Journal Article

    Van Iersel, M. P.; Villéger, A. C.; Czauderna, T.; Boyd, S. E.; Bergmann, F. T.; Luna, A.; Demir, E.; Sorokin, A.; Dogrusoz, U.; Matsuoka, Y.; more...
    Bioinformatics (2012)

    Fulltext@MSK | Save
  • BioPAX support in CellDesigner
    Journal Article

    Mi, H.; Muruganujan, A.; Demir, E.; Matsuoka, Y.; Funahashi, A.; Kitano, H.; Thomas, P. D.
    Bioinformatics (2011)

    Fulltext@MSK | Save
  • Meeting report from the first meetings of the Computational Modeling in Biology Network (COMBINE)
    Journal Article

    Le Novere, N.; Hucka, M.; Anwar, N.; Bader, G. D.; Demir, E.; Moodie, S.; Sorokin, A.
    Standards in Genomic Sciences (2011)

    Fulltext@MSK | Save
  • Pathway Commons, a web resource for biological pathway data
    Journal Article

    Cerami, E. G.; Gross, B. E.; Demir, E.; Rodchenkov, I.; Babur, O.; Anwar, N.; Schultz, N.; Bader, G. D.; Sander, C.
    Nucleic Acids Research (2011)

    Fulltext@MSK | Save
  • ChiBE: Interactive visualization and manipulation of BioPAX pathway models
    Journal Article

    Babur, O.; Dogrusoz, U.; Demir, E.; Sander, C.
    Bioinformatics (2010)

    Fulltext@MSK | Save