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Vianne Ran Gao

Formats
  1. Journal Article (8)
  2. Meeting Abstract (3)
  3. Editorial (1)
Groups
  1. MSK Grad Students (12)
  2. GSK Faculty (11)
  3. Sloan Kettering Institute Faculty (11)
  4. Center for Molecular Imaging and Biotechnology (CMIB) (10)
  5. Computational and Structural Biology Program Faculty (10)
  6. Alan and Sandra Gerry Metastasis and Tumor Ecosystems Center (9)

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People
  1. Christina Leslie (5)
  2. Dana Pe'er (5)
  3. Ignas Masilionis (5)
  4. Yubin Xie (5)
  5. Alexander Rudensky (4)
  6. Alvaro Quintanal Villalonga (4)

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Years
  1. 2024 (2)
  2. 2023 (4)
  3. 2022 (1)
  4. 2021 (3)
  5. 2020 (2)
Publications
  1. Cancer Cell (2)
  2. Arthritis & Rheumatology (1)
  3. Cell (1)
  4. Genome Biology (1)
  5. Journal of Immunology (1)
  6. Journal of Thoracic Oncology (1)

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Publishers
  1. Cell Press (4)
  2. Nature Publishing Group (2)
  3. American Association for the Advancement of Science (1)
  4. Biomed Central Ltd (1)
  5. Elsevier Inc. (1)
  6. OpenReview (1)

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Results (12)


Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • Rheumatoid arthritis synovial fibroblast modulation of T cell activation
    Meeting Abstract

    Romoff, M.; Gao, V.; Di Carlo, E.; Ramirez, D.; Goodman, S.; Norman, T.; Leslie, C.; Rudensky, A.; Donlin, L.; Smith, M.
    Journal of Immunology (2024)

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  • ChromaFold predicts the 3D contact map from single-cell chromatin accessibility
    Journal Article

    Gao, V. R.; Yang, R.; Das, A.; Luo, R.; Luo, H.; McNally, D. R.; Karagiannidis, I.; Rivas, M. A.; Wang, Z. M.; Barisic, D.; more...
    Nature Communications (2024)

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  • Accelerating batch active learning using continual learning techniques
    Journal Article

    Das, A.; Bhatt, G.; Bhalerao, M.; Gao, V.; Yang, R.; Bilmes, J.
    Transactions on Machine Learning Research (2023)

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  • Drivers of heterogeneity in synovial fibroblasts in rheumatoid arthritis
    Journal Article

    Smith, M. H.; Gao, V. R.; Periyakoil, P. K.; Kochen, A.; DiCarlo, E. F.; Goodman, S. M.; Norman, T. M.; Donlin, L. T.; Leslie, C. S.; Rudensky, A. Y.
    Nature Immunology (2023)

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  • Epiphany: Predicting Hi-C contact maps from 1D epigenomic signals
    Journal Article

    Yang, R.; Das, A.; Gao, V. R.; Karbalayghareh, A.; Noble, W. S.; Bilmes, J. A.; Leslie, C. S.
    Genome Biology (2023)

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  • Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis
    Journal Article

    Burdziak, C.; Alonso-Curbelo, D.; Walle, T.; Reyes, J.; Barriga, F. M.; Haviv, D.; Xie, Y.; Zhao, Z.; Zhao, C. J.; Chen, H. A.; more...
    Science (2023)

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  • Protocol to dissociate, process, and analyze the human lung tissue using single-cell RNA-seq
    Journal Article

    Quintanal-Villalonga, Á; Chan, J. M.; Masilionis, I.; Gao, V. R.; Xie, Y.; Allaj, V.; Chow, A.; Poirier, J. T.; Pe'er, D.; Rudin, C. M.; more...
    STAR Protocols (2022)

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  • Heterogeneity of inflammatory HLA-DR+ synovial fibroblasts in rheumatoid arthritis is driven by responses to leukocyte-derived cytokines
    Meeting Abstract

    Smith, M.; Kochen, A.; Gao, V.; Schizas, M.; DiCarlo, E.; Goodman, S.; Leslie, C.; Donlin, L.; Rudensky, A.
    Arthritis & Rheumatology (2021)

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  • Signatures of plasticity and immunosuppression in a single-cell atlas of human small cell lung cancer
    Meeting Abstract

    Chan, J.; Quintanal-Villalonga, A.; Gao, V.; Xie, Y.; Allaj, V.; Chaudhary, O.; Masilionis, I.; Egger, J.; Chow, A.; Walle, T.; more...
    Journal of Thoracic Oncology (2021)

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  • Signatures of plasticity, metastasis, and immunosuppression in an atlas of human small cell lung cancer
    Journal Article

    Chan, J. M.; Quintanal-Villalonga, Á; Gao, V. R.; Xie, Y.; Allaj, V.; Chaudhary, O.; Masilionis, I.; Egger, J.; Chow, A.; Walle, T.; more...
    Cancer Cell (2021)

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