Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme Journal Article


Authors: Changela, A.; Ho, C. K.; Martins, A.; Shuman, S.; Mondragón, A.
Article Title: Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme
Abstract: The 5′ capping of mammalian pre-mRNAs is initiated by RNA triphosphatase, a member of the cysteine phosphatase superfamily. Here we report the 1.65 Å crystal structure of mouse RNA triphosphatase, which reveals a deep, positively charged active site pocket that can fit a 5′ triphosphate end. Structural, biochemical and mutational results show that despite sharing an HCxxxxxR(S/T) motif, a phosphoenzyme intermediate and a core α/β-fold with other cysteine phosphatases, the mechanism of phosphoanhydride cleavage by mammalian capping enzyme differs from that used by protein phosphatases to hydrolyze phosphomonoesters. The most significant difference is the absence of a carboxylate general acid catalyst in RNA triphosphatase. Residues conserved uniquely among the RNA phosphatase subfamily are important for function in cap formation and are likely to play a role in substrate recognition.
Keywords: unclassified drug; animals; mice; phosphatase; rna triphosphatase; acid anhydride hydrolases; rna; amino acid sequence; molecular sequence data; sequence homology, amino acid; messenger rna; crystal structure; models, molecular; binding sites; catalysis; rna processing; mammals; enzyme structure; phosphate; hydrolysis; protein structure, secondary; mutagenesis; enzyme mechanism; mrna capping; rna capping; nucleotidyltransferases; cysteine derivative; phosphoanhydride; cysteine phosphatase; priority journal; article; capping phenomenon; phosphoester derivative
Journal Title: EMBO Journal
Volume: 20
Issue: 10
ISSN: 0261-4189
Publisher: Wiley Blackwell  
Date Published: 2001-05-15
Start Page: 2575
End Page: 2586
Language: English
DOI: 10.1093/emboj/20.10.2575
PUBMED: 11350947
PROVIDER: scopus
PMCID: PMC125469
DOI/URL:
Notes: Export Date: 21 May 2015 -- Source: Scopus
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MSK Authors
  1. Alexandra I T Martins
    17 Martins
  2. Chong-Kiong Ho
    33 Ho
  3. Stewart H Shuman
    546 Shuman