Ontologizing gene-expression microarray data: Characterizing clusters with gene oncology Journal Article
| Authors: | Robinson, P. N.; Wollstein, A.; Böhme, U.; Beattie, B. |
| Article Title: | Ontologizing gene-expression microarray data: Characterizing clusters with gene oncology |
| Abstract: | Summary: An XML-based Java application is described that provides a function-oriented overview of the results of cluster analysis of gene-expression microarray data based on Gene Ontology terms and associations. The application generates one HTML page with listings of the frequencies of explicit and implicit Gene Ontology annotations for each cluster, and separate, linked pages with listings of explicit annotations for each gene in a cluster. © Oxford University Press 2004; all rights reserved. |
| Keywords: | gene cluster; gene sequence; review; nonhuman; dna replication; genetic analysis; cluster analysis; gene expression profiling; user-computer interface; gene product; genetic transcription; information retrieval; dna; messenger rna; oligonucleotide array sequence analysis; expressed sequence tag; dna microarray; computer program; software; genetic database; phylogeny; natural language processing; information storage and retrieval; vocabulary, controlled; human; priority journal; hypermedia |
| Journal Title: | Bioinformatics |
| Volume: | 20 |
| Issue: | 6 |
| ISSN: | 1367-4803 |
| Publisher: | Oxford University Press |
| Date Published: | 2004-02-05 |
| Start Page: | 979 |
| End Page: | 981 |
| Language: | English |
| DOI: | 10.1093/bioinformatics/bth040 |
| PROVIDER: | scopus |
| PUBMED: | 14764576 |
| DOI/URL: | |
| Notes: | Bioinformatics -- Cited By (since 1996):62 -- Export Date: 16 June 2014 -- CODEN: BOINF -- Source: Scopus |
