PINdb: A database of nuclear protein complexes from human and yeast Journal Article
| Authors: | Luc, P. V.; Tempst, P. |
| Article Title: | PINdb: A database of nuclear protein complexes from human and yeast |
| Abstract: | Summary: Proteins Interacting in the Nucleus database (PINdb) is a database of protein complexes purified from the nucleus of human and yeast cells. It is compiled from the published literature and existing databases. Currently, PINdb contains mostly protein complexes that may be involved in gene transcription. To facilitate comparative analyses and identification of protein complexes, the compositional information is integrated with standardized gene nomenclature, annotation and protein sequences from public databases. The PINdb web interface provides a number of tools for (1) comparison of protein complexes, (2) search for a protein complex by its published name or by a partial list of its components and (3) browsing specific subsets or a functional classification of the complexes. © Oxford University Press 2004; all rights reserved. |
| Keywords: | nonhuman; protein function; protein analysis; complex formation; classification; nuclear protein; computer interface; internet; user-computer interface; genetic transcription; databases, protein; nuclear proteins; standardization; amino acid sequence; protein purification; multiprotein complexes; nomenclature; protein database; yeast cell; fungal proteins; natural language processing; information storage and retrieval; periodicals; database management systems; abstracting and indexing; humans; human; priority journal; article; proteins interacting in the nucleus database |
| Journal Title: | Bioinformatics |
| Volume: | 20 |
| Issue: | 9 |
| ISSN: | 1367-4803 |
| Publisher: | Oxford University Press |
| Date Published: | 2004-04-15 |
| Start Page: | 1413 |
| End Page: | 1415 |
| Language: | English |
| DOI: | 10.1093/bioinformatics/bth114 |
| PROVIDER: | scopus |
| PUBMED: | 15087322 |
| DOI/URL: | |
| Notes: | Bioinformatics -- Cited By (since 1996):21 -- Export Date: 16 June 2014 -- CODEN: BOINF -- Source: Scopus |
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