KRAS variants are associated with survival outcomes and genomic alterations in biliary tract cancers Journal Article


Authors: Gelfer, R.; Gulla, A.; Kalvin, H. L.; Song, Y.; Harding, J.; Abou-Alfa, G. K.; O'Reilly, E. M.; Park, W.; Chandwani, R.; Wei, A.; Kingham, P.; Drebin, J.; Balachandran, V.; D'Angelica, M.; Soares, K.; Gonen, M.; Jarnagin, W. R.
Article Title: KRAS variants are associated with survival outcomes and genomic alterations in biliary tract cancers
Abstract: PURPOSEKRAS variants are associated with poor outcomes in biliary tract cancers (BTCs). This study assesses the prevalence of KRAS variants and their association with survival and recurrence in patients with intrahepatic cholangiocarcinoma (IHC), extrahepatic cholangiocarcinoma (EHC), and gallbladder adenocarcinoma (GB).METHODSIn this cross-sectional, single-institution study at Memorial Sloan Kettering, tumors from 985 patients treated between 2004 and 2022 with IHC, EHC, and GB who underwent either curative-intent resection or were treated with chemotherapy for unresectable disease were used for targeted sequencing.RESULTSOf the 985 patients sequenced, 15% had a KRAS mutation. Five hundred and seventy-Two had unresectable disease (n = 395 IHC, n = 71 EHC, n = 106 GB) and 413 were treated with curative-intent resection (n = 175 IHC, n = 119 EHC, and n = 119 GB). Median follow-up time was 18 months (IQR, 11-31). KRAS G12D mutations were most common in IHC (38%) and EHC (37%) tumors. Mutations in SF3B1 co-occurred with mutant KRAS in IHC and EHC, with comutant resectable patients having worse survival after adjusting for tumor type (hazard ratio [HR], 4.04 [95% CI, 1.45 to 11.2]; P =.007). KRAS G12 mutations were associated with worse survival in patients with IHC compared with wild-Type (WT) or other KRAS mutations, regardless of resection status (unresectable P <.001, resectable P =.011). After adjusting for clinical covariates, KRAS G12 mutations remained a prognostic indicator for patients with IHC compared with WT (HR, 1.99 [95% CI, 1.41 to 2.80]; P <.001).CONCLUSIONThe adverse impact of KRAS mutations in BTC is driven by G12 alterations in patients with IHC regardless of resection status, which was not observed in GB or EHC. There are unique comutational partners in distinct BTC subsets. These differences have important clinical implications in the era of KRAS-Targeted therapeutics. © American Society of Clinical Oncology.
Keywords: adult; cancer chemotherapy; cancer survival; controlled study; aged; cancer surgery; major clinical study; somatic mutation; cancer recurrence; systemic therapy; gemcitabine; cancer patient; follow up; antineoplastic agent; antineoplastic metal complex; tumor volume; cohort analysis; genetic association; genetic variability; continuous infusion; retrospective study; protein p53; oncogene; cross-sectional study; intrahepatic cholangiocarcinoma; inoperable cancer; cyclin dependent kinase inhibitor 2a; oncogene k ras; codon; floxuridine; recurrence free survival; transforming growth factor beta receptor 2; isocitrate dehydrogenase 1; smad4 protein; clinical outcome; gallbladder adenocarcinoma; extrahepatic cholangiocarcinoma; liver circulation; genomic mutation; lymph vessel metastasis; arid1a gene; human; male; female; article; sf3b1 gene
Journal Title: JCO Precision Oncology
Volume: 8
ISSN: 2473-4284
Publisher: American Society of Clinical Oncology  
Date Published: 2024-12-01
Start Page: e2400263
Language: English
DOI: 10.1200/po.24.00263
PUBMED: 39642327
PROVIDER: scopus
DOI/URL:
Notes: Article -- MSK Cancer Center Support Grant (P30 CA008748) acknowledged in PDF -- Source: Scopus
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MSK Authors
  1. Mithat Gonen
    1028 Gonen
  2. James Joseph Harding
    250 Harding
  3. Ghassan Abou-Alfa
    568 Abou-Alfa
  4. William R Jarnagin
    903 Jarnagin
  5. T Peter Kingham
    609 Kingham
  6. Eileen O'Reilly
    780 O'Reilly
  7. Jeffrey Adam Drebin
    165 Drebin
  8. Wungki Park
    98 Park
  9. Alice Chia-Chi Wei
    197 Wei
  10. Kevin Cerqueira Soares
    135 Soares
  11. Hannah Kalvin
    30 Kalvin
  12. Yi Song
    10 Song
  13. Rebecca Gelfer
    2 Gelfer