Genomic analysis and clinical correlations of non-small cell lung cancer brain metastasis Journal Article


Authors: Skakodub, A.; Walch, H.; Tringale, K. R.; Eichholz, J.; Imber, B. S.; Vasudevan, H. N.; Li, B. T.; Moss, N. S.; Hei Yu, K. K.; Mueller, B. A.; Powell, S.; Razavi, P.; Yu, H. A.; Reis-Filho, J. S.; Gomez, D.; Schultz, N.; Pike, L. R. G.
Article Title: Genomic analysis and clinical correlations of non-small cell lung cancer brain metastasis
Abstract: Up to 50% of patients with non-small cell lung cancer (NSCLC) develop brain metastasis (BM), yet the study of BM genomics has been limited by tissue access, incomplete clinical data, and a lack of comparison with paired extracranial specimens. Here we report a cohort of 233 patients with resected and sequenced (MSK-IMPACT) NSCLC BM and comprehensive clinical data. With matched samples (47 primary tumor, 42 extracranial metastatic), we show CDKN2A/B deletions and cell cycle pathway alterations to be enriched in the BM samples. Meaningful clinico-genomic correlations are noted, namely EGFR alterations in leptomeningeal disease (LMD) and MYC amplifications in multifocal regional brain progression. Patients who developed early LMD frequently have had uncommon, multiple, and persistently detectable EGFR driver mutations. The distinct mutational patterns identified in BM specimens compared to other tissue sites suggest specific biologic underpinnings of intracranial progression. © 2023, Springer Nature Limited.
Keywords: genetics; brain tumor; brain neoplasms; carcinoma, non-small-cell lung; lung neoplasms; epidermal growth factor receptor; lung tumor; brain; genomics; non small cell lung cancer; erbb receptors; cell component; cancer; humans; human
Journal Title: Nature Communications
Volume: 14
ISSN: 2041-1723
Publisher: Nature Publishing Group  
Date Published: 2023-08-17
Start Page: 4980
Language: English
DOI: 10.1038/s41467-023-40793-x
PUBMED: 37591896
PROVIDER: scopus
PMCID: PMC10435547
DOI/URL:
Notes: The MSK Cancer Center Support Grant (P30 CA008748) is acknowledged in the PubMed record. Corresponding MSK author Luke R. G. Pike -- Source: Scopus
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MSK Authors
  1. Simon Nicholas Powell
    335 Powell
  2. Boris A Mueller
    106 Mueller
  3. Helena Alexandra Yu
    291 Yu
  4. Daniel R Gomez
    244 Gomez
  5. Nikolaus D Schultz
    491 Schultz
  6. Pedram Razavi
    184 Razavi
  7. Bob Tingkan Li
    279 Li
  8. Nelson Moss
    90 Moss
  9. Brandon Stuart Imber
    225 Imber
  10. Kathryn Ries Tringale
    102 Tringale
  11. Henry Stuart Walch
    100 Walch
  12. Kenny Kwok Hei Yu
    33 Yu
  13. Luke R. Pike
    70 Pike