Integrative genetic analysis identifies FLVCR1 as a plasma-membrane choline transporter in mammals Journal Article


Authors: Kenny, T. C.; Khan, A.; Son, Y.; Yue, L.; Heissel, S.; Sharma, A.; Pasolli, H. A.; Liu, Y.; Gamazon, E. R.; Alwaseem, H.; Hite, R. K.; Birsoy, K.
Article Title: Integrative genetic analysis identifies FLVCR1 as a plasma-membrane choline transporter in mammals
Abstract: Genome-wide association studies (GWASs) of serum metabolites have the potential to uncover genes that influence human metabolism. Here, we combined an integrative genetic analysis that associates serum metabolites to membrane transporters with a coessentiality map of metabolic genes. This analysis revealed a connection between feline leukemia virus subgroup C cellular receptor 1 (FLVCR1) and phosphocholine, a downstream metabolite of choline metabolism. Loss of FLVCR1 in human cells strongly impairs choline metabolism due to the inhibition of choline import. Consistently, CRISPR-based genetic screens identified phospholipid synthesis and salvage machinery as synthetic lethal with FLVCR1 loss. Cells and mice lacking FLVCR1 exhibit structural defects in mitochondria and upregulate integrated stress response (ISR) through heme-regulated inhibitor (HRI) kinase. Finally, Flvcr1 knockout mice are embryonic lethal, which is partially rescued by choline supplementation. Altogether, our findings propose FLVCR1 as a major choline transporter in mammals and provide a platform to discover substrates for unknown metabolite transporters. © 2023 Elsevier Inc.
Keywords: metabolism; choline; mitochondria; phosphatidylcholine; flvcr1; pcarp
Journal Title: Cell Metabolism
Volume: 35
Issue: 6
ISSN: 1550-4131
Publisher: Elsevier Inc.  
Date Published: 2023-06-06
Start Page: 1057
End Page: 1071.e12
Language: English
DOI: 10.1016/j.cmet.2023.04.003
PUBMED: 37100056
PROVIDER: scopus
PMCID: PMC10367582
DOI/URL:
Notes: The MSK Cancer Center Support Grant (P30 CA008748) is acknowledged in the PDF -- Source: Scopus
Altmetric
Citation Impact
BMJ Impact Analytics
MSK Authors
  1. Richard Kevin Hite
    25 Hite
  2. Yeeun Son
    3 Son