Computerized diagnosis of liver tumors from CT scans using a deep neural network approach Journal Article


Authors: Midya, A.; Chakraborty, J.; Srouji, R.; Narayan, R. R.; Boerner, T.; Zheng, J.; Pak, L. M.; Creasy, J. M.; Escobar, L. A.; Harrington, K. A.; Gonen, M.; D'Angelica, M. I.; Kingham, T. P.; Do, R. K. G.; Jarnagin, W. R.; Simpson, A. L.
Article Title: Computerized diagnosis of liver tumors from CT scans using a deep neural network approach
Abstract: The liver is a frequent site of benign and malignant, primary and metastatic tumors. Hepatocellular carcinoma (HCC) and intrahepatic cholangiocarcinoma (ICC) are the most common primary liver cancers, and colorectal liver metastasis (CRLM) is the most common secondary liver cancer. Although the imaging characteristic of these tumors is central to optimal clinical management, it relies on imaging features that are often non-specific, overlap, and are subject to inter-observer variability. Thus, in this study, we aimed to categorize liver tumors automatically from CT scans using a deep learning approach that objectively extracts discriminating features not visible to the naked eye. Specifically, we used a modified Inception v3 network-based classification model to classify HCC, ICC, CRLM, and benign tumors from pretreatment portal venous phase computed tomography (CT) scans. Using a multi-institutional dataset of 814 patients, this method achieved an overall accuracy rate of 96%, with sensitivity rates of 96%, 94%, 99%, and 86% for HCC, ICC, CRLM, and benign tumors, respectively, using an independent dataset. These results demonstrate the feasibility of the proposed computer-assisted system as a novel non-invasive diagnostic tool to classify the most common liver tumors objectively. © 2013 IEEE.
Keywords: hepatocellular carcinoma; liver cell carcinoma; carcinoma, hepatocellular; liver neoplasms; tomography, x-ray computed; pathology; diagnostic imaging; liver metastasis; computerized tomography; tumors; liver tumor; bile duct carcinoma; bile duct neoplasms; bile ducts, intrahepatic; cholangiocarcinoma; medical computing; diseases; computed tomography; artificial neural network; bile duct tumor; intrahepatic bile duct; computer-aided diagnosis; computer aided diagnosis; liver tumors; noninvasive medical procedures; humans; human; computed tomography scan; x-ray computed tomography; deep learning; computer aided instruction; deep neural networks; neural networks, computer; inception v3; benign and malignant tumors; benign tumour
Journal Title: IEEE Journal of Biomedical and Health Informatics
Volume: 27
Issue: 5
ISSN: 2168-2194
Publisher: IEEE  
Date Published: 2023-05-01
Start Page: 2456
End Page: 2464
Language: English
DOI: 10.1109/jbhi.2023.3248489
PUBMED: 37027632
PROVIDER: scopus
PMCID: PMC10245221
DOI/URL:
Notes: Article -- MSK Cancer Center Support Grant (P30 CA008748) acknowledged in PubMed and PDF -- MSK corresponding author is William Jarnagin -- Export Date: 31 May 2023 -- Source: Scopus
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MSK Authors
  1. Mithat Gonen
    1029 Gonen
  2. William R Jarnagin
    903 Jarnagin
  3. Kinh Gian Do
    257 Do
  4. T Peter Kingham
    609 Kingham
  5. Amber L Simpson
    64 Simpson
  6. Linda Ma Pak
    30 Pak
  7. Jian Ying Zheng
    17 Zheng
  8. John Creasy
    15 Creasy
  9. Abhishek Midya
    17 Midya
  10. Thomas Boerner
    71 Boerner
  11. Rami Mahmoud Srouji
    8 Srouji
  12. Raja R Narayan
    18 Narayan