Comprehensive molecular and clinicopathologic analysis of 200 pulmonary invasive mucinous adenocarcinomas identifies distinct characteristics of molecular subtypes Journal Article


Authors: Chang, J. C.; Offin, M.; Falcon, C.; Brown, D.; Houck-Loomis, B. R.; Meng, F.; Rudneva, V. A.; Won, H. H.; Amir, S.; Montecalvo, J.; Desmeules, P.; Kadota, K.; Adusumilli, P. S.; Rusch, V. W.; Teed, S.; Sabari, J. K.; Benayed, R.; Nafa, K.; Borsu, L.; Li, B. T.; Schram, A. M.; Arcila, M. E.; Travis, W. D.; Ladanyi, M.; Drilon, A.; Rekhtman, N.
Article Title: Comprehensive molecular and clinicopathologic analysis of 200 pulmonary invasive mucinous adenocarcinomas identifies distinct characteristics of molecular subtypes
Abstract: Purpose: Invasive mucinous adenocarcinoma (IMA) is a unique subtype of lung adenocarcinoma, characterized genomically by frequent KRAS mutations or specific gene fusions, most commonly involving NRG1. Comprehensive analysis of a large series of IMAs using broad DNA- and RNA-sequencing methods is still lacking, and it remains unclear whether molecular subtypes of IMA differ clinicopathologically. Experimental Design: A total of 200 IMAs were analyzed by 410-gene DNA next-generation sequencing (MSK-IMPACT; n 1⁄4 136) or hotspot 8-oncogene genotyping (n 1⁄4 64). Driver-negative cases were further analyzed by 62-gene RNA sequencing (MSK-Fusion) and those lacking fusions were further tested by whole-exome sequencing and whole-transcriptome sequencing (WTS). Results: Combined MSK-IMPACT and MSK-Fusion testing identified mutually exclusive driver alterations in 96% of IMAs, including KRAS mutations (76%), NRG1 fusions (7%), ERBB2 alterations (6%), and other less common events. In addition, WTS identified a novel NRG2 fusion (F11R–NRG2). Overall, targetable gene fusions were identified in 51% of KRAS wild-type IMAs, leading to durable responses to targeted therapy in some patients. Compared with KRAS-mutant IMAs, NRG1-rearranged tumors exhibited several more aggressive characteristics, including worse recurrence-free survival (P < 0.0001). Conclusions: This is the largest molecular study of IMAs to date, where we demonstrate the presence of a major oncogenic driver in nearly all cases. This study is the first to document more aggressive characteristics of NRG1-rearranged IMAs, ERBB2 as the third most common alteration, and a novel NRG2 fusion in these tumors. Comprehensive molecular testing of KRAS wild-type IMAs that includes fusion testing is essential, given the high prevalence of alterations with established and investigational targeted therapies in this subset. © 2021 American Association for Cancer Research.
Journal Title: Clinical Cancer Research
Volume: 27
Issue: 14
ISSN: 1078-0432
Publisher: American Association for Cancer Research  
Date Published: 2021-07-15
Start Page: 4066
End Page: 4076
Language: English
DOI: 10.1158/1078-0432.Ccr-21-0423
PUBMED: 33947695
PROVIDER: scopus
PMCID: PMC8282731
DOI/URL:
Notes: Article -- Export Date: 2 August 2021 -- Source: Scopus
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MSK Authors
  1. Natasha Rekhtman
    434 Rekhtman
  2. Valerie W Rusch
    869 Rusch
  3. Khedoudja Nafa
    244 Nafa
  4. Marc Ladanyi
    1332 Ladanyi
  5. William D Travis
    749 Travis
  6. Kyuichi Kadota
    85 Kadota
  7. Maria Eugenia Arcila
    668 Arcila
  8. Alexander Edward Drilon
    634 Drilon
  9. Alison Michele Schram
    125 Schram
  10. Helen Hyeong-Eun Won
    109 Won
  11. Rym Benayed
    188 Benayed
  12. Jason Chih-Peng Chang
    141 Chang
  13. Bob Tingkan Li
    279 Li
  14. Joshua K Sabari
    36 Sabari
  15. Fanli   Meng
    27 Meng
  16. Michael David Offin
    172 Offin
  17. David Norman Brown
    92 Brown
  18. Christina Jade Falcon
    44 Falcon
  19. Sharon Yonit Amir
    1 Amir
  20. Sarah Elizabeth Teed
    3 Teed