Discovery of SARS-CoV-2 main protease inhibitors using a synthesis-directed de novo design model Journal Article


Authors: Morris, A.; McCorkindale, W.; The COVID Moonshot Consortium; Drayman, N.; Chodera, J. D.; Tay, S.; London, N.; Lee, A. A.
Contributors: Bruce Macdonald, H.; Rufa, D.; Wittmann, M.; Boby, M. L.; Glass, W. G.
Article Title: Discovery of SARS-CoV-2 main protease inhibitors using a synthesis-directed de novo design model
Abstract: The SARS-CoV-2 main viral protease (Mpro) is an attractive target for antivirals given its distinctiveness from host proteases, essentiality in the viral life cycle and conservation across coronaviridae. We launched the COVID Moonshot initiative to rapidly develop patent-free antivirals with open science and open data. Here we report the use of machine learning for de novo design, coupled with synthesis route prediction, in our campaign. We discover novel chemical scaffolds active in biochemical and live virus assays, synthesized with model generated routes. This journal is © The Royal Society of Chemistry.
Journal Title: Chemical Communications
Volume: 57
Issue: 48
ISSN: 1359-7345
Publisher: Royal Society of Chemistry  
Date Published: 2021-06-18
Start Page: 5909
End Page: 5912
Language: English
DOI: 10.1039/d1cc00050k
PUBMED: 34008627
PROVIDER: scopus
PMCID: PMC8204246
DOI/URL:
Notes: Article -- Export Date: 1 July 2021 -- Source: Scopus
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MSK Authors
  1. John Damon Chodera
    118 Chodera
  2. Melissa Lynn Boby
    6 Boby
  3. William Glass
    5 Glass
  4. Dominic Antonio Rufa
    4 Rufa