Robust deep learning classification of adamantinomatous craniopharyngioma from limited preoperative radiographic images Journal Article


Authors: Prince, E. W.; Whelan, R.; Mirsky, D. M.; Stence, N.; Staulcup, S.; Klimo, P.; Anderson, R. C. E.; Niazi, T. N.; Grant, G.; Souweidane, M.; Johnston, J. M.; Jackson, E. M.; Limbrick, D. D. Jr; Smith, A.; Drapeau, A.; Chern, J. J.; Kilburn, L.; Ginn, K.; Naftel, R.; Dudley, R.; Tyler-Kabara, E.; Jallo, G.; Handler, M. H.; Jones, K.; Donson, A. M.; Foreman, N. K.; Hankinson, T. C.
Article Title: Robust deep learning classification of adamantinomatous craniopharyngioma from limited preoperative radiographic images
Abstract: Deep learning (DL) is a widely applied mathematical modeling technique. Classically, DL models utilize large volumes of training data, which are not available in many healthcare contexts. For patients with brain tumors, non-invasive diagnosis would represent a substantial clinical advance, potentially sparing patients from the risks associated with surgical intervention on the brain. Such an approach will depend upon highly accurate models built using the limited datasets that are available. Herein, we present a novel genetic algorithm (GA) that identifies optimal architecture parameters using feature embeddings from state-of-the-art image classification networks to identify the pediatric brain tumor, adamantinomatous craniopharyngioma (ACP). We optimized classification models for preoperative Computed Tomography (CT), Magnetic Resonance Imaging (MRI), and combined CT and MRI datasets with demonstrated test accuracies of 85.3%, 83.3%, and 87.8%, respectively. Notably, our GA improved baseline model performance by up to 38%. This work advances DL and its applications within healthcare by identifying optimized networks in small-scale data contexts. The proposed system is easily implementable and scalable for non-invasive computer-aided diagnosis, even for uncommon diseases. © 2020, The Author(s).
Journal Title: Scientific Reports
Volume: 10
ISSN: 2045-2322
Publisher: Nature Publishing Group  
Date Published: 2020-10-09
Start Page: 16885
Language: English
DOI: 10.1038/s41598-020-73278-8
PUBMED: 33037266
PROVIDER: scopus
PMCID: PMC7547020
DOI/URL:
Notes: Article -- Export Date: 2 November 2020 -- Source: Scopus
Altmetric
Citation Impact
BMJ Impact Analytics
MSK Authors