Integration of transcriptional and mutational data simplifies the stratification of peripheral T-cell lymphoma Journal Article


Authors: Maura, F.; Agnelli, L.; Leongamornlert, D.; Bolli, N.; Chan, W. C.; Dodero, A.; Carniti, C.; Heavican, T. B.; Pellegrinelli, A.; Pruneri, G.; Butler, A.; Bhosle, S. G.; Chiappella, A.; Di Rocco, A.; Zinzani, P. L.; Zaja, F.; Piva, R.; Inghirami, G.; Wang, W.; Palomero, T.; Iqbal, J.; Neri, A.; Campbell, P. J.; Corradini, P.
Article Title: Integration of transcriptional and mutational data simplifies the stratification of peripheral T-cell lymphoma
Abstract: The histological diagnosis of peripheral T-cell lymphoma (PTCL) can represent a challenge, particularly in the case of closely related entities such as angioimmunoblastic T-lymphoma (AITL), PTCL-not otherwise specified (PTCL-NOS), and ALK-negative anaplastic large-cell lymphoma (ALCL). Although gene expression profiling and next generations sequencing have been proven to define specific features recurrently associated with distinct entities, genomic-based stratifications have not yet led to definitive diagnostic criteria and/or entered into the routine clinical practice. Herein, to improve the current molecular classification between AITL and PTCL-NOS, we analyzed the transcriptional profiles from 503 PTCLs stratified according to their molecular configuration and integrated them with genomic data of recurrently mutated genes (RHOA G17V , TET2, IDH2 R172 , and DNMT3A) in 53 cases (39 AITLs and 14 PTCL-NOSs) included in the series. Our analysis unraveled that the mutational status of RHOA G17V , TET2, and DNMT3A poorly correlated, individually, with peculiar transcriptional fingerprints. Conversely, in IDH2 R172 samples a strong transcriptional signature was identified that could act as a surrogate for mutational status. The integrated analysis of clinical, mutational, and molecular data led to a simplified 19-gene signature that retains high accuracy in differentiating the main nodal PTCL entities. The expression levels of those genes were confirmed in an independent cohort profiled by RNA-sequencing. © 2019 Wiley Periodicals, Inc.
Keywords: adult; aged; gene mutation; major clinical study; gene; genetic transcription; peripheral t cell lymphoma; cancer classification; tet2 gene; correlational study; genetic correlation; idh2 gene; dnmt3a gene; rhoa gene; human; male; female; priority journal; article
Journal Title: American Journal of Hematology
Volume: 94
Issue: 6
ISSN: 0361-8609
Publisher: John Wiley & Sons, Inc.  
Date Published: 2019-06-01
Start Page: 628
End Page: 634
Language: English
DOI: 10.1002/ajh.25450
PUBMED: 30829413
PROVIDER: scopus
PMCID: PMC6684242
DOI/URL:
Notes: Article -- Export Date: 3 June 2019 -- Source: Scopus
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  1. Francesco Maura
    56 Maura