BCOR upregulation in a poorly differentiated synovial sarcoma with SS18L1-SSX1 fusion—A pathologic and molecular pitfall Journal Article


Authors: Kao, Y. C.; Sung, Y. S.; Zhang, L.; Kenan, S.; Singer, S.; Tap, W. D.; Swanson, D.; Dickson, B. C.; Antonescu, C. R.
Article Title: BCOR upregulation in a poorly differentiated synovial sarcoma with SS18L1-SSX1 fusion—A pathologic and molecular pitfall
Abstract: The diagnosis of poorly differentiated synovial sarcoma (PD-SS) may be challenging due to overlapping morphologic features with other undifferentiated round cell sarcomas (URCS). Particularly relevant is the histologic overlap and shared BCOR overexpression between a subset of SS and URCS with various BCOR genetic abnormalities. Here, we report a case of PD-SS lacking the canonical SS18-SSX gene fusion, but showing strong BCOR immunoreactivity and BCOR gene abnormalities by FISH, which were misinterpreted as a URCS with BCOR gene rearrangements. The tumor had an unusual clinical presentation arising as an intraneural tumor in the ankle of a 29-year-old female. The tumor displayed a mixture of fascicular spindle cells and undifferentiated round cell components. FISH studies showed no SS18 gene abnormality; however, RNA sequencing identified a fusion transcript involving SS18L1 (a paralog gene of SS18 at 20q13.33) and SSX1. Further FISH testing validated rearrangements in SSX1 and SS18L1 genes, in addition to complex structural abnormalities of the Xp11.22-4 region. This is the second reported SS case harboring an SS18L1-SSX1 alternative fusion variant, similarly occurring in association with a large nerve. The lack of SS18 gene rearrangements by FISH corroborated with the BCOR overexpression at both mRNA and protein level may result in diagnostic pitfalls with URCS with BCOR gene abnormalities. Our results further suggest that BCOR upregulation is emerging as a common downstream pathway for SS with either typical SS18-SSX transcript or with rare fusion variants, such as SS18L1-SSX. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.
Journal Title: Genes Chromosomes and Cancer
Volume: 56
Issue: 4
ISSN: 1045-2257
Publisher: Wiley Periodicals, Inc  
Date Published: 2017-04-01
Start Page: 296
End Page: 302
Language: English
DOI: 10.1002/gcc.22435
PROVIDER: scopus
PUBMED: 27914109
PMCID: PMC5546405
DOI/URL:
Notes: Article -- Export Date: 2 March 2017 -- Source: Scopus
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MSK Authors
  1. Cristina R Antonescu
    895 Antonescu
  2. Samuel Singer
    337 Singer
  3. William Douglas Tap
    372 Tap
  4. Lei Zhang
    194 Zhang
  5. Yun Shao Sung
    124 Sung
  6. Yu-Chien   Kao
    23 Kao