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  1. Computational Biology Program Faculty (52)
  2. Sloan Kettering Institute Faculty (52)
  3. GSK Faculty (45)
  4. Center for Molecular Imaging and Biotechnology (44)
  5. MSK Grad Students (23)
  6. Sloan Kettering Institute Postdocs (23)
  7. Alan and Sandra Gerry Metastasis and Tumor Ecosystems Center (12)
  8. Center for Hematologic Malignancies (10)
  9. Immunology Program Faculty (10)
  10. Hematologic Malignancies Research (9)
Search Within
  1. "Computational Biology Program Faculty"
Formats
  1. Journal Article (30)
  2. Meeting Abstract (18)
  3. Review (2)
  4. Editorial (1)
  5. Miscellaneous (1)
Groups
  1. Computational Biology Program Faculty (52)
  2. Sloan Kettering Institute Faculty (52)
  3. GSK Faculty (45)
  4. Center for Molecular Imaging and Biotechnology (44)
  5. MSK Grad Students (23)
  6. Sloan Kettering Institute Postdocs (23)

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People
  1. John Chodera (20)
  2. Christina Leslie (15)
  3. Joao Xavier (10)
  4. Chris Sander (6)
  5. Alexander Rudensky (5)
  6. Kyle Beauchamp (4)

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Years
  1. 2024 (2)
  2. 2023 (4)
  3. 2022 (2)
  4. 2021 (5)
  5. 2020 (4)
  6. 2019 (5)

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Publications
  1. Biophysical Journal (20)
  2. Cell (11)
  3. Cell Host & Microbe (4)
  4. Cell Reports (4)
  5. Cell Stem Cell (3)
  6. Trends in Cancer (3)

More Publications

Results (52)


Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • Development and benchmarking of a self-consistent force field for proteins and small molecules from open force field
    Meeting Abstract

    Cavender, C. E.; Behara, P. K.; Dotson, D. L.; Friedman, A. J.; Gokey, T.; Horton, J. T.; Pulido, I.; Thompson, M. W.; Wagner, J.; Wang, L.; more...
    Biophysical Journal (2024)

    Fulltext@MSK | Save
  • An efficient protocol for accurately triaging molecules in the development of a SARS-CoV-2 main protease inhibitor
    Meeting Abstract

    Payne, A. M.; Kaminow, B.; Chodera, J. D.
    Biophysical Journal (2024)

    Fulltext@MSK | Save
  • Fast, conformation-independent charges with graph convolutional networks
    Meeting Abstract

    Wang, L.; Boothroyd, S.; Horton, J. T.; Thompson, M. W.; Shirts, M. R.; Cole, D. J.; Chodera, J. D.; Mobley, D. L.
    Biophysical Journal (2023)

    Fulltext@MSK | Save
  • Development and benchmarking of an open, self-consistent force field for proteins and small molecules from the open force field initiative
    Meeting Abstract

    Cavender, C. E.; Behara, P. K.; Boothroyd, S.; Dotson, D. L.; Horton, J. T.; Mitchell, J. A.; Pulido, I.; Thompson, M. W.; Wagner, J.; Wang, L.; more...
    Biophysical Journal (2023)

    Fulltext@MSK | Save
  • The TaxUMAP atlas: Efficient display of large clinical microbiome data reveals ecological competition in protection against bacteremia
    Journal Article

    Schluter, J.; Djukovic, A.; Taylor, B. P.; Yan, J.; Duan, C.; Hussey, G. A.; Liao, C.; Sharma, S.; Fontana, E.; Amoretti, L. A.; more...
    Cell Host & Microbe (2023)

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  • Fast, conformation-independent charges with graph convolutional networks
    Meeting Abstract

    Wang, L.; Boothroyd, S.; Horton, J. T.; Thompson, M. W.; Shirts, M. R.; Cole, D. J.; Chodera, J. D.; Mobley, D. L.
    Biophysical Journal (2023)

    Fulltext@MSK | Save
  • Optimizing the future: How mathematical models inform treatment schedules for cancer
    Review

    Mathur, D.; Barnett, E.; Scher, H. I.; Xavier, J. B.
    Trends in Cancer (2022)

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  • Building an open, self-consistent force field for biopolymers and small molecules with the open force field initiative infrastructure
    Meeting Abstract

    Cavender, C. E.; Behara, P. K.; Boothroyd, S.; Dotson, D. L.; Pulido, I. J.; Thompson, M. W.; Wagner, J.; Wang, L.; Chodera, J. D.; Mobley, D. L.; more...
    Biophysical Journal (2022)

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  • Unclouding Clostridiodes difficile virulence with systems biology
    Editorial

    Mishra, V.; Xavier, J. B.
    Cell Host & Microbe (2021)

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  • Cooperation between melanoma cell states promotes metastasis through heterotypic cluster formation
    Journal Article

    Campbell, N. R.; Rao, A.; Hunter, M. V.; Sznurkowska, M. K.; Briker, L.; Zhang, M.; Baron, M.; Heilmann, S.; Deforet, M.; Kenny, C.; more...
    Developmental Cell (2021)

    Fulltext@MSK | Save

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