Search Within

Gunnar Ratsch

Formats
  1. Journal Article (52)
  2. Conference Paper (8)
  3. Meeting Abstract (7)
  4. Book Section (1)
Groups
  1. Sloan Kettering Institute Postdocs (44)
  2. GSK Faculty (29)
  3. MSK Grad Students (22)
  4. Center for Molecular Imaging and Biotechnology (CMIB) (19)
  5. Department of Pathology and Laboratory Medicine (16)
  6. Human Oncology and Pathogenesis Program (16)

More Groups

People
  1. Andre Kahles (30)
  2. Kjong Van Lehmann (17)
  3. Stefan Stark (17)
  4. Nikolaus Schultz (15)
  5. Joshua Armenia (14)
  6. Natalie Davidson (14)

More People

Years
  1. 2021 (2)
  2. 2020 (16)
  3. 2019 (4)
  4. 2018 (3)
  5. 2017 (5)
  6. 2016 (5)

More Years

Publications
  1. Nature Communications (10)
  2. Bioinformatics (6)
  3. Nature (4)
  4. Cell (3)
  5. Plant Cell (3)
  6. BMC Bioinformatics (2)

More Publications

Publishers
  1. Nature Publishing Group (22)
  2. Oxford University Press (8)
  3. Public Library of Science (6)
  4. American Association for Cancer Research (5)
  5. Cell Press (4)
  6. Springer (4)

More Publishers

Results (68)


Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • RNA G-quadruplexes cause eIF4A-dependent oncogene translation in cancer
    Journal Article

    Wolfe, A. L.; Singh, K.; Zhong, Y.; Drewe, P.; Rajasekhar, V. K.; Sanghvi, V. R.; Mavrakis, K. J.; Jiang, M.; Roderick, J. E.; Van Der Meulen, J.; more...
    Nature (2014)

    Fulltext@MSK | Save
  • Oqtans: The RNA-seq workbench in the cloud for complete and reproducible quantitative transcriptome analysis
    Journal Article

    Sreedharan, V. T.; Schultheiss, S. J.; Jean, G.; Kahles, A.; Bohnert, R.; Drewe, P.; Mudrakarta, P.; Görnitz, N.; Zeller, G.; Rätsch, G.
    Bioinformatics (2014)

    Fulltext@MSK | Save
  • Oqtans: a multifunctional workbench for RNA-seq data analysis
    Meeting Abstract

    Sreedharan, V. T.; Schultheiss, S. J.; Jean, G.; Kahles, A.; Bohnert, R.; Drewe, P.; Mudrakarta, P.; Görnitz, N.; Zeller, G.; Ratsch, G.
    BMC Bioinformatics (2014)

    Fulltext@MSK | Save
  • Multi-task learning for computational biology: Overview and outlook
    Book Section

    Widmer, C.; Kloft, M.; Rätsch, G.
    In Schölkopf, B.; Luo, Z.; Vovk, V. (Eds.) Empirical Inference: Festschrift in Honor of Vladimir N. Vapnik (2013)

    Fulltext@MSK | Save
  • An empirical analysis of topic modeling for mining cancer clinical notes
    Conference Paper

    Chan, K. R.; Lou, X.; Karaletsos, T.; Crosbie, C.; Gardos, S.; Artz, D.; Ratsch, G.
    IEEE (2013)

    Fulltext@MSK | Save
  • Ecological Modeling from Time-Series Inference: Insight into Dynamics and Stability of Intestinal Microbiota
    Journal Article

    Stein, R. R.; Bucci, V.; Toussaint, N. C.; Buffie, C. G.; Rätsch, G.; Pamer, E. G.; Sander, C.; Xavier, J. B.
    PLoS Computational Biology (2013)

    Fulltext@MSK | Save
  • Assessment of transcript reconstruction methods for RNA-seq
    Journal Article

    Steijger, T.; Abril, J. F.; Engström, P. G.; Kokocinski, F.; Akerman, M.; Alioto, T.; Ambrosini, G.; Antonarakis, S. E.; Behr, J.; Bertone, P.; more...
    Nature Methods (2013)

    Fulltext@MSK | Save
  • Systematic evaluation of spliced alignment programs for RNA-seq data
    Journal Article

    Engström, P. G.; Steijger, T.; Sipos, B.; Grant, G. R.; Kahles, A.; Rätsch, G.; Goldman, N.; Hubbard, T. J.; Harrow, J.; Guigó, R.; more...
    Nature Methods (2013)

    Fulltext@MSK | Save
  • Nonsense-mediated decay of alternative precursor mRNA splicing variants is a major determinant of the Arabidopsis steady state transcriptome
    Journal Article

    Drechsel, G.; Kahles, A.; Kesarwani, A. K.; Stauffer, E.; Behr, J.; Drewe, P.; Rätsch, G.; Wachter, A.
    Plant Cell (2013)

    Fulltext@MSK | Save
  • The Cancer Genome Atlas Pan-Cancer analysis project
    Journal Article

    The Cancer Genome Atlas Research Network; Weinstein, J. N.; Collisson, E. A.; Mills, G. B.; Mills Shaw, K. R.; Ozenberger, B. A.; Ellrott, K.; Shmulevich, I.; Sander, C.; Stuart, J. M.
    Nature Genetics (2013)

    Fulltext@MSK | Save