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Anna Mary Varghese

  1. "Computational Oncology Service"
Formats
  1. Journal Article (17)
  2. Meeting Abstract (7)
Groups
  1. Center for Molecular Imaging and Biotechnology (CMIB) (24)
  2. Center for Pancreatic Cancer Research (24)
  3. Computational Oncology Service (24)
  4. Department of Medicine (24)
  5. Epidemiology and Biostatistics (24)
  6. GSK Faculty (24)

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People
  1. Nikolaus Schultz (22)
  2. Michael Berger (16)
  3. Leonard Saltz (13)
  4. Andrea Cercek Hanjis (12)
  5. David Solit (12)
  6. Rona Yaeger (12)

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Years
  1. 2025 (2)
  2. 2024 (2)
  3. 2023 (1)
  4. 2022 (2)
  5. 2021 (2)
  6. 2020 (4)

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Publications
  1. Journal of Clinical Oncology (5)
  2. Annals of Oncology (3)
  3. Clinical Cancer Research (3)
  4. JNCI: Journal of the National Cancer Institute (3)
  5. JAMA Oncology (2)
  6. Nature (2)

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Publishers
  1. Oxford University Press (6)
  2. American Association for Cancer Research (5)
  3. American Society of Clinical Oncology (5)
  4. Nature Publishing Group (3)
  5. American Medical Association (2)
  6. Cell Press (2)

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Results (24)

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  • RNA neoantigen vaccines prime long-lived CD8+ T cells in pancreatic cancer
    Journal Article

    Sethna, Z.; Guasp, P.; Reiche, C.; Milighetti, M.; Ceglia, N.; Patterson, E.; Lihm, J.; Payne, G.; Lyudovyk, O.; Rojas, L. A.; more...
    Nature (2025)

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  • Long-term outcomes in patients with advanced intrahepatic cholangiocarcinoma treated with hepatic arterial infusion chemotherapy
    Journal Article

    Cowzer, D.; Soares, K.; Walch, H.; Gönen, M.; Boucher, T. M.; Do, R. K. G.; Harding, J. J.; Varghese, A. M.; Reidy-Lagunes, D.; Saltz, L.; more...
    JNCI: Journal of the National Cancer Institute (2025)

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  • Precision medicine for pancreatic cancer: Characterizing the clinicogenomic landscape and outcomes of KRAS G12C-mutated disease
    Journal Article

    Keane, F.; Chou, J. F.; Walch, H.; Schoenfeld, J.; Singhal, A.; Cowzer, D.; Harrold, E.; O'Connor, C. A.; Park, W.; Varghese, A.; more...
    JNCI: Journal of the National Cancer Institute (2024)

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  • Deep-learning model for tumor-type prediction using targeted clinical genomic sequencing data
    Journal Article

    Darmofal, M.; Suman, S.; Atwal, G.; Toomey, M.; Chen, J. F.; Chang, J. C.; Vakiani, E.; Varghese, A. M.; Balakrishnan Rema, A.; Syed, A.; more...
    Cancer Discovery (2024)

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  • Personalized RNA neoantigen vaccines stimulate T cells in pancreatic cancer
    Journal Article

    Rojas, L. A.; Sethna, Z.; Soares, K. C.; Olcese, C.; Pang, N.; Patterson, E.; Lihm, J.; Ceglia, N.; Guasp, P.; Chu, A.; more...
    Nature (2023)

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  • Characterizing the clinico-genomic landscape and outcomes of KRAS G12C mutated pancreas cancer
    Meeting Abstract

    Keane, F.; Park, W.; Varghese, A.; Balogun, F.; Yu, K.; El Dika, I.; Khalil, D.; Kelsen, D. P.; Reidy-Lagunes, D.; Ku, G. Y.; more...
    Annals of Oncology (2022)

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  • Genomic characterization of metastatic patterns from prospective clinical sequencing of 25,000 patients
    Journal Article

    Nguyen, B.; Fong, C.; Luthra, A.; Smith, S. A.; DiNatale, R. G.; Nandakumar, S.; Walch, H.; Chatila, W. K.; Madupuri, R.; Kundra, R.; more...
    Cell (2022)

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  • A comprehensive comparison of early-onset and average-onset colorectal cancers
    Journal Article

    Cercek, A.; Chatila, W. K.; Yaeger, R.; Walch, H.; Dos Santos Fernandes, G.; Krishnan, A.; Palmaira, L.; Maio, A.; Kemel, Y.; Srinivasan, P.; more...
    JNCI: Journal of the National Cancer Institute (2021)

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  • Therapeutic implications of germline testing in patients with advanced cancers
    Journal Article

    Stadler, Z. K.; Maio, A.; Chakravarty, D.; Kemel, Y.; Sheehan, M.; Salo-Mullen, E.; Tkachuk, K.; Fong, C. J.; Nguyen, B.; Erakky, A.; more...
    Journal of Clinical Oncology (2021)

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  • Genomic methods identify homologous recombination deficiency in pancreas adenocarcinoma and optimize treatment selection
    Journal Article

    Park, W.; Chen, J.; Chou, J. F.; Varghese, A. M.; Yu, K. H.; Wong, W.; Capanu, M.; Balachandran, V.; McIntyre, C. A.; El Dika, I.; more...
    Clinical Cancer Research (2020)

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