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Sohrab Prakash Shah

  1. "MSK Grad Students"
Formats
  1. Journal Article (16)
  2. Meeting Abstract (4)
Groups
  1. Computational Oncology Service (20)
  2. Epidemiology and Biostatistics (20)
  3. GSK Faculty (20)
  4. MSK Grad Students (20)
  5. Sloan Kettering Institute Postdocs (17)
  6. Center for Molecular Imaging and Biotechnology (CMIB) (11)

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People
  1. Andrew Mcpherson (10)
  2. Nicholas Ceglia (9)
  3. Hongyu Shi (8)
  4. Marc Williams (8)
  5. Tyler Funnell (8)
  6. Dmitriy Zamarin (6)

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Years
  1. 2024 (5)
  2. 2023 (3)
  3. 2022 (8)
  4. 2021 (1)
  5. 2020 (2)
  6. 2019 (1)
Publications
  1. Nature (4)
  2. Nature Communications (3)
  3. Cancer Research (2)
  4. Clinical Cancer Research (2)
  5. Blood (1)
  6. Cancer Cell (1)

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Publishers
  1. Nature Publishing Group (8)
  2. American Association for Cancer Research (4)
  3. Cell Press (2)
  4. American Society for Clinical Investigation (1)
  5. American Society of Hematology (1)
  6. Biomed Central Ltd (1)

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Results (20)

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  • Automated real-world data integration improves cancer outcome prediction
    Journal Article

    Jee, J.; Fong, C.; Pichotta, K.; Tran, T. N.; Luthra, A.; Waters, M.; Fu, C.; Altoe, M.; Liu, S. Y.; Maron, S. B.; more...
    Nature (2024)

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  • Inferring replication timing and proliferation dynamics from single-cell DNA sequencing data
    Journal Article

    Weiner, A. C.; Williams, M. J.; Shi, H.; Vázquez-García, I.; Salehi, S.; Rusk, N.; Aparicio, S.; Shah, S. P.; McPherson, A.
    Nature Communications (2024)

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  • Multiplexed spatial profiling of Hodgkin Reed–Sternberg cell neighborhoods in classic Hodgkin lymphoma
    Journal Article

    Pourmaleki, M.; Jones, C. J.; Mellinghoff, S. D.; Greenstein, B. D.; Kumar, P.; Foronda, M.; Navarrete, D. A.; Campos, C.; Roshal, M.; Schultz, N.; more...
    Clinical Cancer Research (2024)

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  • Single-cell mtDNA dynamics in tumors is driven by coregulation of nuclear and mitochondrial genomes
    Journal Article

    Kim, M.; Gorelick, A. N.; Vàzquez-García, I.; Williams, M. J.; Salehi, S.; Shi, H.; Weiner, A. C.; Ceglia, N.; Funnell, T.; Park, T.; more...
    Nature Genetics (2024)

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  • Allele-specific transcriptional effects of subclonal copy number alterations enable genotype-phenotype mapping in cancer cells
    Journal Article

    Shi, H.; Williams, M. J.; Satas, G.; Weiner, A. C.; McPherson, A.; Shah, S. P.
    Nature Communications (2024)

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  • Cancer phylogenetic tree inference at scale from 1000s of single cell genomes
    Journal Article

    Salehi, S.; Dorri, F.; Chern, K.; Kabeer, F.; Rusk, N.; Funnell, T.; Williams, M. J.; Lai, D.; Andronescu, M.; Campbell, K. R.; more...
    Peer Community Journal (2023)

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  • Determinants of survival with combined HER2 and PD-1 blockade in metastatic esophagogastric cancer
    Journal Article

    Maron, S. B.; Chatila, W.; Walch, H.; Chou, J. F.; Ceglia, N.; Ptashkin, R.; Do, R. K. G.; Paroder, V.; Pandit-Taskar, N.; Lewis, J. S.; more...
    Clinical Cancer Research (2023)

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  • Epigenetic dysregulation from chromosomal transit in micronuclei
    Journal Article

    Agustinus, A. S.; Al-Rawi, D.; Dameracharla, B.; Raviram, R.; Jones, B. S. C. L.; Stransky, S.; Scipioni, L.; Luebeck, J.; Di Bona, M.; Norkunaite, D.; more...
    Nature (2023)

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  • Characterization of genomic diversity in high grade serous ovarian and triple negative breast cancer at single cell resolution
    Meeting Abstract

    Williams, M. J.; Funnell, T.; O'Flanagan, C. H.; McPherson, A.; Aparicio, S.; Shah, S. P.
    Cancer Research (2022)

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  • Immune and malignant cell phenotypes of ovarian cancer are determined by distinct mutational processes
    Meeting Abstract

    Vázquez-García, I.; Uhlitz, F.; Ceglia, N.; Lim, J. L.; Wu, M.; Mohibullah, N.; Ruiz, A. E. B.; Boehm, K. M.; Bojilova, V.; Fong, C. J.; more...
    Cancer Research (2022)

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