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Sohrab Prakash Shah

  1. "Center for Molecular Imaging and Biotechnology"
Formats
  1. Journal Article (27)
  2. Meeting Abstract (12)
  3. Review (2)
  4. Guidelines (1)
Groups
  1. Center for Molecular Imaging and Biotechnology (42)
  2. Computational Oncology Service (42)
  3. Epidemiology and Biostatistics (42)
  4. GSK Faculty (42)
  5. Sloan Kettering Institute Postdocs (18)
  6. MSK Grad Students (9)

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People
  1. Andrew Mcpherson (15)
  2. Marc Williams (8)
  3. Ignacio Vazquez Garcia (7)
  4. Adam Weiner (5)
  5. Diljot Singh Grewal (5)
  6. Tyler Funnell (5)

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Years
  1. 2024 (9)
  2. 2023 (2)
  3. 2022 (10)
  4. 2021 (3)
  5. 2020 (8)
  6. 2019 (9)

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Publications
  1. Cancer Research (5)
  2. Nature Communications (5)
  3. Genome Biology (4)
  4. Blood (3)
  5. Clinical Cancer Research (3)
  6. Nature Genetics (3)

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Publishers
  1. Nature Publishing Group (10)
  2. American Association for Cancer Research (9)
  3. Biomed Central Ltd (4)
  4. American Society of Hematology (3)
  5. Elsevier Inc. (2)
  6. Public Library of Science (2)

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Results (42)

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  • Luminal breast epithelial cells of BRCA1 or BRCA2 mutation carriers and noncarriers harbor common breast cancer copy number alterations
    Journal Article

    Williams, M. J.; Oliphant, M. U. J.; Au, V.; Liu, C.; Baril, C.; O’Flanagan, C.; Lai, D.; Beatty, S.; Van Vliet, M.; Yiu, J. C. H.; more...
    Nature Genetics (2024)

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  • Single cell whole genome measurement of genomic heterogeneity and clonal evolution in multiple myeloma
    Meeting Abstract

    McPherson, A.; Maclachlan, K.; Myers, M.; Satas, G.; Garcés, J. J.; Lee, H.; Bahlis, N. J.; Usmani, S.; Shah, S.; Maura, F.
    Clinical Lymphoma, Myeloma and Leukemia (2024)

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  • Disappearing signet ring cell adenocarcinoma in gastric cancer patients
    Journal Article

    Sreeram, A.; Stroobant, E. E.; Laszkowska, M.; Guilford, P.; Shimada, S.; Nishimura, M.; Shah, S.; Vardhana, S.; Tang, L. H.; Strong, V. E.
    Annals of Surgical Oncology (2024)

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  • Inferring replication timing and proliferation dynamics from single-cell DNA sequencing data
    Journal Article

    Weiner, A. C.; Williams, M. J.; Shi, H.; Vázquez-García, I.; Salehi, S.; Rusk, N.; Aparicio, S.; Shah, S. P.; McPherson, A.
    Nature Communications (2024)

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  • Multiplexed spatial profiling of Hodgkin Reed–Sternberg cell neighborhoods in classic Hodgkin lymphoma
    Journal Article

    Pourmaleki, M.; Jones, C. J.; Mellinghoff, S. D.; Greenstein, B. D.; Kumar, P.; Foronda, M.; Navarrete, D. A.; Campos, C.; Roshal, M.; Schultz, N.; more...
    Clinical Cancer Research (2024)

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  • Single-cell decoding of drug induced transcriptomic reprogramming in triple negative breast cancers
    Journal Article

    Kabeer, F.; Tran, H.; Andronescu, M.; Singh, G.; Lee, H.; Salehi, S.; Wang, B.; Biele, J.; Brimhall, J.; Gee, D.; more...
    Genome Biology (2024)

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  • Weakly supervised deep learning predicts immunotherapy response in solid tumors based on PD-L1 expression
    Journal Article

    Ligero, M.; Serna, G.; El Nahhas, O. S. M.; Sansano, I.; Mauchanski, S.; Viaplana, C.; Calderaro, J.; Toledo, R. A.; Dienstmann, R.; Vanguri, R. S.; more...
    Cancer Research Communications (2024)

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  • Single-cell mtDNA dynamics in tumors is driven by coregulation of nuclear and mitochondrial genomes
    Journal Article

    Kim, M.; Gorelick, A. N.; Vàzquez-García, I.; Williams, M. J.; Salehi, S.; Shi, H.; Weiner, A. C.; Ceglia, N.; Funnell, T.; Park, T.; more...
    Nature Genetics (2024)

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  • Allele-specific transcriptional effects of subclonal copy number alterations enable genotype-phenotype mapping in cancer cells
    Journal Article

    Shi, H.; Williams, M. J.; Satas, G.; Weiner, A. C.; McPherson, A.; Shah, S. P.
    Nature Communications (2024)

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  • Cancer phylogenetic tree inference at scale from 1000s of single cell genomes
    Journal Article

    Salehi, S.; Dorri, F.; Chern, K.; Kabeer, F.; Rusk, N.; Funnell, T.; Williams, M. J.; Lai, D.; Andronescu, M.; Campbell, K. R.; more...
    Peer Community Journal (2023)

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