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Sohrab Prakash Shah

  1. "Center for Molecular Imaging and Biotechnology"
Formats
  1. Journal Article (27)
  2. Meeting Abstract (12)
  3. Review (2)
  4. Guidelines (1)
Groups
  1. Center for Molecular Imaging and Biotechnology (42)
  2. Computational Oncology Service (42)
  3. Epidemiology and Biostatistics (42)
  4. GSK Faculty (42)
  5. Sloan Kettering Institute Postdocs (18)
  6. MSK Grad Students (9)

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People
  1. Andrew Mcpherson (15)
  2. Marc Williams (8)
  3. Ignacio Vazquez Garcia (7)
  4. Adam Weiner (5)
  5. Diljot Singh Grewal (5)
  6. Tyler Funnell (5)

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Years
  1. 2024 (9)
  2. 2023 (2)
  3. 2022 (10)
  4. 2021 (3)
  5. 2020 (8)
  6. 2019 (9)

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Publications
  1. Cancer Research (5)
  2. Nature Communications (5)
  3. Genome Biology (4)
  4. Blood (3)
  5. Clinical Cancer Research (3)
  6. Nature Genetics (3)

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Publishers
  1. Nature Publishing Group (10)
  2. American Association for Cancer Research (9)
  3. Biomed Central Ltd (4)
  4. American Society of Hematology (3)
  5. Elsevier Inc. (2)
  6. Public Library of Science (2)

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Results (42)

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  • Chemogenomic profiling of breast cancer patient-derived xenografts reveals targetable vulnerabilities for difficult-to-treat tumors
    Journal Article

    Savage, P.; Pacis, A.; Kuasne, H.; Liu, L.; Lai, D.; Wan, A.; Dankner, M.; Martinez, C.; Muñoz-Ramos, V.; Pilon, V.; more...
    Communications Biology (2020)

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  • Eleven grand challenges in single-cell data science
    Review

    Lähnemann, D.; Köster, J.; Szczurek, E.; McCarthy, D. J.; Hicks, S. C.; Robinson, M. D.; Vallejos, C. A.; Campbell, K. R.; Beerenwinkel, N.; Mahfouz, A.; more...
    Genome Biology (2020)

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  • PRAME expression is correlated with treatment outcome and specific features of the tumor microenvironment in classical Hodgkin lymphoma
    Meeting Abstract

    Takata, K.; Chong, L. C.; Thakur, A.; Aoki, T.; Mottok, A.; Chavez, E.; Farinha, P.; Slack, G. W.; Hoodles, P.; Shah, S. P.; more...
    Blood (2019)

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  • Cell of origin, mutation and microenvironment: Modeling early events of endometriosis associated cancers
    Meeting Abstract

    Cochrane, D. R.; Tessier-Cloutier, B.; Ho, G.; Campbell, K.; Gibbard, E.; Lawrence, K. M.; Nazeran, T.; Karnezis, A. N.; Salamanca, C.; Cheng, A. S.; more...
    Clinical Cancer Research (2019)

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  • Models and analytic techniques of Mullerian tissue-derived organoids
    Meeting Abstract

    Ho, G. C.; Cochrane, D. R.; Gibbard, E. W.; Campbell, K.; Tessier-Cloutier, B.; Greening, K.; Kalantari, F.; Trigo-Gonzalez, G.; Wang, Y.; McAlpine, J. N.; more...
    Clinical Cancer Research (2019)

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  • Clonal decomposition and DNA replication states defined by scaled single-cell genome sequencing
    Journal Article

    Laks, E.; McPherson, A.; Zahn, H.; Lai, D.; Steif, A.; Brimhall, J.; Biele, J.; Wang, B.; Masud, T.; Ting, J.; more...
    Cell (2019)

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  • Dissociation of solid tumor tissues with cold active protease for single-cell RNA-seq minimizes conserved collagenase-associated stress responses
    Journal Article

    O'Flanagan, C. H.; Campbell, K. R.; Zhang, A. W.; Kabeer, F.; Lim, J. L. P.; Biele, J.; Eirew, P.; Lai, D.; McPherson, A.; Kong, E.; more...
    Genome Biology (2019)

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  • Molecular profiling and molecular classification of endometrioid ovarian carcinomas
    Journal Article

    Cybulska, P.; Da Cruz Paula, A.; Tseng, J.; Leitao, M. M. Jr; Bashashati, A.; Huntsman, D. G.; Nazeran, T. M.; Aghajanian, C.; Abu-Rustum, N. R.; DeLair, D. F.; more...
    Gynecologic Oncology (2019)

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  • Somatic mutation detection and classification through probabilistic integration of clonal population information
    Journal Article

    Dorri, F.; Jewell, S.; Bouchard-Côté, A.; Shah, S. P.
    Communications Biology (2019)

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  • Integrated structural variation and point mutation signatures in cancer genomes using correlated topic models
    Journal Article

    Funnell, T.; Zhang, A. W.; Grewal, D.; McKinney, S.; Bashashati, A.; Wang, Y. K.; Shah, S. P.
    PLoS Computational Biology (2019)

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