Synapse - Gowtham Jayakumaran

Results (36)

A deep multiple instance learning framework improves microsatellite instability detection from tumor next generation sequencing

Journal Article

Ziegler, J.; Hechtman, J. F.; Rana, S.; Ptashkin, R. N.; Jayakumaran, G.; Middha, S.; Chavan, S. S.; Vanderbilt, C.; DeLair, D.; Casanova, J.; more...
Nature Communications (2025)

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Diffuse pleural mesotheliomas with genomic near-haploidization: A newly recognized subset with distinct clinical, histologic, and molecular features

Journal Article

Yang, S. R.; Jayakumaran, G.; Benhamida, J.; Febres-Aldana, C. A.; Fanaroff, R.; Chang, J.; Gedvilaite, E.; Villafania, L. B.; Sauter, J. L.; Offin, M.; more...
Clinical Cancer Research (2024)

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Enhanced clinical assessment of hematologic malignancies through routine paired tumor and normal sequencing

Journal Article

Ptashkin, R. N.; Ewalt, M. D.; Jayakumaran, G.; Kiecka, I.; Bowman, A. S.; Yao, J. J.; Casanova, J.; Lin, Y. T. D.; Petrova-Drus, K.; Mohanty, A. S.; more...
Nature Communications (2023)

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Mutant-RB1 circulating tumor DNA in the blood of unilateral retinoblastoma patients: What happens during enucleation surgery: A pilot study

Journal Article

Abramson, D. H.; Mandelker, D. L.; Brannon, A. R.; Dunkel, I. J.; Benayed, R.; Berger, M. F.; Arcila, M. E.; Ladanyi, M.; Friedman, D. N.; Jayakumaran, G.; more...
PLoS ONE (2023)

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Overall survival with circulating tumor DNA-guided therapy in advanced non-small-cell lung cancer

Journal Article

Jee, J.; Lebow, E. S.; Yeh, R.; Das, J. P.; Namakydoust, A.; Paik, P. K.; Chaft, J. E.; Jayakumaran, G.; Brannon, A. R.; Benayed, R.; more...
Nature Medicine (2022)

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Diagnostic yield and clinical relevance of expanded genetic testing for cancer patients

Journal Article

Ceyhan-Birsoy, O.; Jayakumaran, G.; Kemel, Y.; Misyura, M.; Aypar, U.; Jairam, S.; Yang, C.; Li, Y.; Mehta, N.; Maio, A.; more...
Genome Medicine (2022)

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Comprehensive assessment of germline pathogenic variant detection in tumor-only sequencing

Journal Article

Terraf, P.; Pareja, F.; Brown, D. N.; Ceyhan-Birsoy, O.; Misyura, M.; Rana, S.; O'Reilly, E.; Carlo, M. I.; Aghajanian, C.; Liu, Y.; more...
Annals of Oncology (2022)

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Molecular characterization of peritoneal mesotheliomas

Journal Article

Offin, M.; Yang, S. R.; Egger, J.; Jayakumaran, G.; Spencer, R. S.; Lopardo, J.; Nash, G. M.; Cercek, A.; Travis, W. D.; Kris, M. G.; more...
Journal of Thoracic Oncology (2022)

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Paired tumor-normal sequencing provides insights into the TP53-related cancer spectrum in patients with Li-Fraumeni syndrome

Journal Article

Ceyhan-Birsoy, O.; Selenica, P.; Chui, M. H.; Jayakumaran, G.; Ptashkin, R.; Misyura, M.; Aypar, U.; Jairam, S.; Yang, C.; Li, Y.; more...
JNCI: Journal of the National Cancer Institute (2021)

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Overall survival with circulating tumor DNA-guided therapy in advanced non-small cell lung cancer

Meeting Abstract

Jee, J.; Lebow, E. S.; Murciano-Goroff, Y. R.; Jayakumaran, G.; Shen, R.; Brannon, A. R.; Benayed, R.; Namakydoust, A.; Offin, M.; Paik, P. K.; more...
Journal of Clinical Oncology (2021)

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