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A bioinformatics framework for high-sensitivity detection and monitoring of oncogenic gene fusions in plasma cfDNA

Meeting Abstract

Patel, J.; Hasan, M.; Meng, F.; Jing, X.; Tam, G.; Johnson, I.; Zheng, Y.; Bandlamudi, C.; Stewart, C.; Won, H.; more...
Cancer Research (2019)

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Temperature-dependent transcription artifacts and cell population biases in scRNAseq data are minimized by tissue dissociation at low temperatures

Meeting Abstract

O'Flanagan, C. H.; Campbell, K. R.; Kabeer, F.; Zhang, A.; Lim, J.; Shah, S. P.; Aparicio, S.
Cancer Research (2019)

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Genetic mechanisms of primary chemotherapy resistance in pediatric acute myeloid leukemia

Meeting Abstract

McNeer, N.; Philip, J.; Geiger, H.; Ries, R. E.; Lavallee, V. P.; Walsh, M.; Shah, M.; Arora, K.; Emde, A. K.; Robine, N.; more...
Cancer Research (2019)

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A plug-and-play infrastructure for scalable bioinformatics operations

Meeting Abstract

Medina-Martinez, J. S.; Arango-Ossa, J. E.; Gundem, G.; Levine, M. F.; Patel, M.; Farnoud, N. R.; Yellapantula, V. D.; Teng, G.; McCarter, J. G.; Bernard, E.; more...
Cancer Research (2019)

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The use of CT radiomics to predict immune infiltrate in pancreatic ductal adenocarcinoma

Meeting Abstract

McIntyre, C. A.; Chakraborty, J.; Koszalka, M.; Bassmann, J.; Chou, Y.; Gonen, M.; Allen, P. J.; Kingham, T. P.; D'Angelica, M. I.; Drebin, J. A.; more...
Cancer Research (2019)

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PI3K pathway mediated splicing defects in ER+ breast cancers

Meeting Abstract

Ladewig, E.; Fairchild, L.; Scaltriti, M.; Leslie, C.; Toska, E.; Baselga, J.
Cancer Research (2019)

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CDK6 overexpression promotes resistance to CDK4/6 inhibitors in breast cancer

Meeting Abstract

Li, Q.; Razavi, P.; Li, Z.; Da Cruz Paula, A. F.; Brogi, E.; Scaltriti, M.; Reis, J. S.; Chandarlapaty, S.
Cancer Research (2019)

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Hotspot mutations in the core spliceosomal protein SF3B1 promote breast tumorigenesis

Meeting Abstract

Liu, B.; Ki, M.; Abdel-Wahab, O.; Chandarlapaty, S.
Cancer Research (2019)

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Direct genome editing of patient-derived xenografts for rapid in vivo functional genomics

Meeting Abstract

Hulton, C. H.; Costa, E. A.; Rudin, C. M.; Poirier, J. T.
Cancer Research (2019)

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The premalignant state captured in the landscape of somatic mutations can reveal the cancer cell-of-origin

Meeting Abstract

Kubler, K.; Karlic, R.; Haradhvala, N. J.; Ha, K.; Kim, J.; Kuzman, M.; Jiao, W.; Gakkhar, S.; Mouw, K. W.; Braunstein, L. Z.; more...
Cancer Research (2019)

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