HLA-DR peptide occupancy can be regulated with a wide variety of small molecules Journal Article


Authors: Blazekovic, F.; Odukoya, D.; Butler, S. N.; Mauro, J. A.; Ramsamooj, M.; Puleo, E.; Szekeres, K.; Dana, D.; Kumar, S.; Ragupathi, G.; Blanck, G.
Article Title: HLA-DR peptide occupancy can be regulated with a wide variety of small molecules
Abstract: HLA-DR is the most commonly expressed and likely the most medically important human MHC class II, antigen presenting protein. In a normal immune response, HLA-DR binds to antigenic peptide and the HLA-DR/peptide complex binds to a T-cell receptor, thus contributing to T-cell activation and stimulation of an immune response against the antigen. When foreign antigen is not present, HLA-DR binds endogenous peptide which, under normal conditions does not stimulate an immune response. In most cases, the human peptide is CLIP, but a certain percentage of HLA-DR molecules will be present at the cell surface with other human peptides. We have recently shown that cell surface, CLIP/HLA-DR ratios are a measure of peptide heterogeneity, and in particular, changes in CLIP/HLA-DR ratios represent changes in the occupancy of HLA-DR by other, endogenous peptides. For example, treatment of cells with the HDAC inhibitor, Entinostat, leads to an upregulation of Cathepsin L1 and replacement of Cathepsin L1 senstitive peptides with HLA-DR binding, Cathepsin L1 resistant peptides, an alteration that can be at least partially assessed via assessment of CLIP/HLA-DR cell surface ratios. Here we assay for CLIP/HLA-DR ratios following treatment of immortalized B-cells with a variety of common drugs, almost all of which indicate significant changes in the CLIP/HLA-DR ratios. Furthermore, the CLIP/HLA-DR ratio changes parallel the impact of the drug panoply on cell viability, suggesting that alterations in the HLA-DR peptidome are governed by a variety of mechanisms, rather than exclusively dependent on a dedicated peptide loading process. These results raise questions about how FDA approved drugs may affect the immune response, and whether any of these drugs could be useful as vaccine adjuvants? © 2016, Taylor & Francis.
Keywords: proteases; clip; epitope diversity; hla-dr peptidome; raji b-cells; protease bioinformatics
Journal Title: Human Vaccines & Immunotherapeutics
Volume: 12
Issue: 3
ISSN: 2164-5515
Publisher: Taylor & Francis Group  
Date Published: 2016-03-01
Start Page: 593
End Page: 598
Language: English
DOI: 10.1080/21645515.2015.1089370
PROVIDER: scopus
PUBMED: 26453454
PMCID: PMC4964726
DOI/URL:
Notes: Article -- Export Date: 2 August 2016 -- Source: Scopus
Altmetric
Citation Impact
BMJ Impact Analytics
MSK Authors
  1. Govindaswami Ragupathi
    144 Ragupathi