A single H:CDR3 residue in the anti-digoxin antibody 26-10 modulates specificity for C16-substituted digoxin analogs Journal Article


Authors: Short, M. K.; Jeffrey, P. D.; Demirjian, A.; Margolies, M. N.
Article Title: A single H:CDR3 residue in the anti-digoxin antibody 26-10 modulates specificity for C16-substituted digoxin analogs
Abstract: We constructed Fab libraries of bacteriophage-displayed H:CDR3 mutants in the high-affinity anti-digoxin antibody 26-10 to determine structural constraints on affinity and specificity for digoxin. Libraries of mutant Fabs randomized at five or 10 contiguous positions were panned against digoxin and three C16-substituted analogs, gitoxin (16-OH), 16-formylgitoxin and 16-acetylgitoxin. The sequence data from 83 different mutant Fabs showed highly restricted consensus patterns at positions H:100, 100a and 100b for binding to digoxin; these residues contact digoxin in the 26-10:digoxin co-crystal structure. Several mutant Fabs obtained following panning on digoxin-BSA showed increased affinity for digoxin compared with 26-10 and retained the wild-type (wt) Trp at position 100. Those Fabs selected following panning on C16-substituted analogs showed enhanced binding to the analogs. Replacement of H:Trp100 by Arg resulted in mutants that bound better to the analogs than to digoxin. This specificity change was unexpected, as C16 lies on the opposite side of digoxin from H:CDR3. Substitution of wt Trp by Arg appears to alter specificity by allowing the hapten to shift toward H:CDR3, thereby providing room for C16 substituents in the region of H:CDR1.
Keywords: sequence analysis; mutation; nonhuman; mutant protein; amino acid substitution; immunoglobulin; digoxin; amino acid sequence; immunoglobulin heavy chains; molecular sequence data; antibody specificity; crystal structure; protein structure; antigen binding; anti-arrhythmia agents; arginine; antibody affinity; peptide library; immunoglobulin fragments; consensus sequence; bacteriophage; cardiotonic agents; complementarity determining regions; immunoglobulin fab fragments; hapten; humans; priority journal; article; bacteriophage display; digoxin antibody; digoxin antibody f(ab) fragment; gitaloxin
Journal Title: Protein Engineering
Volume: 14
Issue: 4
ISSN: 0269-2139
Publisher: Oxford University Press  
Date Published: 2001-04-01
Start Page: 287
End Page: 296
Language: English
PUBMED: 11391021
PROVIDER: scopus
DOI: 10.1093/protein/14.4.287
DOI/URL:
Notes: Export Date: 21 May 2015 -- Source: Scopus
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  1. Philip D Jeffrey
    30 Jeffrey