Multitask learning in computational biology Conference Paper


Authors: Widmer, C.; Ratsch, G.
Editors: Guyon, I.; Dror, G.; Lemaire, V.; Taylor, G.; Silver, D.
Title: Multitask learning in computational biology
Conference Title: 28th International Conference on Machine Learning
Abstract: Computational Biology provides a wide range of applications for Multitask Learning (MTL) methods. As the generation of labels often is very costly in the biomedical domain, combining data from different related problems or tasks is a promising strategy to reduce label cost. In this paper, we present two problems from sequence biology, where MTL was successfully applied. For this, we use regularization-based MTL methods, with a special focus on the case of a hierarchical relationship between tasks. Furthermore, we propose strategies to refine the measure of task relatedness, which is of central importance in MTL and finally give some practical guidelines, when MTL strategies are likely to pay off.
Journal Title JMLR: Workshop and Conference Proceedings
Volume: 27
Conference Dates: 2011 Jun 28-Jul 2
Conference Location: Bellevue, WA
ISBN: 1938-7228
Publisher: JMLR  
Date Published: 2012-06-27
Start Page: 207
End Page: 216
Language: English
PROVIDER: manual
Notes: Unsupervised and Transfer Learning workshop; In: JMLR Workshop and Conference Proceedings (1938-7228)