Interaction of CarD with RNA polymerase mediates Mycobacterium tuberculosis viability, rifampin resistance, and pathogenesis Journal Article


Authors: Weiss, L. A.; Harrison, P. G.; Nickels, B. E.; Glickman, M. S.; Campbell, E. A.; Darst, S. A.; Stallings, C. L.
Article Title: Interaction of CarD with RNA polymerase mediates Mycobacterium tuberculosis viability, rifampin resistance, and pathogenesis
Abstract: Mycobacterium tuberculosis infection continues to cause substantial human suffering. New chemotherapeutic strategies, which require insight into the pathways essential for M. tuberculosis pathogenesis, are imperative. We previously reported that depletion of the CarD protein in mycobacteria compromises viability, resistance to oxidative stress and fluoroquinolones, and pathogenesis. CarD associates with the RNA polymerase (RNAP), but it has been unknown which of the diverse functions of CarD are mediated through the RNAP; this question must be answered to understand the CarD mechanism of action. Herein, we describe the interaction between the M. tuberculosis CarD and the RNAP β subunit and identify point mutations that weaken this interaction. The characterization of mycobacterial strains with attenuated CarD/RNAP β interactions demonstrates that the CarD/ RNAP β association is required for viability and resistance to oxidative stress but not for fluoroquinolone resistance. Weakening the CarD/RNAP β interaction also increases the sensitivity of mycobacteria to rifampin and streptomycin. Surprisingly, depletion of the CarD protein did not affect sensitivity to rifampin. These findings define the CarD/RNAP interaction as a new target for chemotherapeutic intervention that could also improve the efficacy of rifampin treatment of tuberculosis. In addition, our data demonstrate that weakening the CarD/RNAP β interaction does not completely phenocopy the depletion of CarD and support the existence of functions for CarD independent of direct RNAP bindin. © 2012, American Society for Microbiology.
Keywords: controlled study; pathogenesis; nonhuman; protein function; mouse; models, biological; protein depletion; protein protein interaction; animal experiment; animal model; protein binding; transcription factors; antibiotic resistance; mycobacterium tuberculosis; anti-bacterial agents; drug resistance, bacterial; amino acid sequence; molecular sequence data; models, molecular; oxidative stress; mutant proteins; point mutation; protein interaction mapping; rifampicin; antibiotic sensitivity; tuberculosis; dna-directed rna polymerases; caspase recruitment domain signaling protein; microbial viability; bacterial viability; streptomycin; virulence; rifampin; rna polymerase beta subunit
Journal Title: Journal of Bacteriology
Volume: 194
Issue: 20
ISSN: 0021-9193
Publisher: American Society for Microbiology  
Date Published: 2012-10-01
Start Page: 5621
End Page: 5631
Language: English
DOI: 10.1128/jb.00879-12
PROVIDER: scopus
PMCID: PMC3458692
PUBMED: 22904282
DOI/URL:
Notes: --- - "Export Date: 3 December 2012" - "CODEN: JOBAA" - "Source: Scopus"
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  1. Michael Glickman
    110 Glickman