Genomic alterations and outcomes with VEGF-targeted therapy in patients with clear cell renal cell carcinoma Journal Article


Authors: Carlo, M. I.; Manley, B.; Patil, S.; Woo, K. M.; Coskey, D. T.; Redzematovic, A.; Arcila, M.; Ladanyi, M.; Lee, W.; Chen, Y. B.; Lee, C. H.; Feldman, D. R.; Hakimi, A. A.; Motzer, R. J.; Hsieh, J. J.; Voss, M. H.
Article Title: Genomic alterations and outcomes with VEGF-targeted therapy in patients with clear cell renal cell carcinoma
Abstract: Background: Mutations in VHL, PBRM1, SETD2, BAP1, and KDM5C are common in clear cell renal cell carcinoma (ccRCC), and presence of certain mutations has been associated with outcomes in patients with non-metastatic disease. Limited information is available regarding the correlation between genomic alterations and outcomes in patients with metastatic disease, including response to VEGF-targeted therapy. Objective: To explore correlations between mutational profiles and cancer-specific outcomes, including response to standard VEGF-targeted agents, in patients with metastatic cc RCC. Methods: A retrospective review of 105 patients with metastatic ccRCC who had received systemic therapy and had targeted next-generation sequencing of tumors was conducted. Genomic alterations were correlated to outcomes, including overall survival and time to treatment failure to VEGF-targeted therapy. Results: The most frequent mutations were detected in VHL (83%), PBRM1 (51%), SETD2 (35%), BAP1 (24%), KDM5C (16%), and TERT (14%). Time to treatment failure with VEGF-targeted therapy differed significantly by PBRM1 mutation status (p = 0.01, median 12.0 months for MT versus 6.9 months for WT) and BAP1 mutation status (p = 0.01, median 6.4 months for MT versus 11.0 months for WT). Shorter overall survival was associated with TERT mutations (p = 0.03, median 29.6 months for MT versus 52.6 months for WT) or BAP1 mutations (p = 0.02, median 28.7 months for MT versus not reached for WT). Conclusions: Genomic alterations in ccRCC tumors have prognostic implications in patients with metastatic disease. BAP1 and TERT promoter mutations may be present in higher frequency than previously thought, and based on this data, deserve further study for their association with poor prognosis. © 2017 - IOS Press and the authors. All rights reserved
Keywords: adult; cancer chemotherapy; cancer survival; treatment outcome; aged; unclassified drug; major clinical study; overall survival; promoter region; somatic mutation; sorafenib; bevacizumab; sunitinib; systemic therapy; cancer patient; follow up; metastasis; protein; cohort analysis; retrospective study; renal cell carcinoma; pazopanib; telomerase reverse transcriptase; genomics; mutation rate; axitinib; von hippel lindau protein; clear cell renal cell carcinoma; vegf-targeted therapy; next generation sequencing; setd2 protein; bap1 protein; time to treatment; kdm5c protein; pbrm1 protein; prognosis; human; male; female; priority journal; article
Journal Title: Kidney Cancer
Volume: 1
Issue: 1
ISSN: 2468-4562
Publisher: IOS Press  
Date Published: 2017-07-01
Start Page: 49
End Page: 56
Language: English
DOI: 10.3233/kca-160003
PROVIDER: scopus
PMCID: PMC6179122
PUBMED: 30334004
DOI/URL:
Notes: The MSK Cancer Center Support Grant (P30 CA008748) is acknowledge in the PDF -- Corresponding authors is MSK author: M.H. Voss -- Source: Scopus
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MSK Authors
  1. Sujata Patil
    511 Patil
  2. Robert Motzer
    1243 Motzer
  3. Darren Richard Feldman
    340 Feldman
  4. Marc Ladanyi
    1326 Ladanyi
  5. Martin Henner Voss
    288 Voss
  6. Yingbei Chen
    393 Chen
  7. James J Hsieh
    125 Hsieh
  8. Maria Eugenia Arcila
    657 Arcila
  9. William Lee
    39 Lee
  10. Abraham Ari Hakimi
    323 Hakimi
  11. Maria Isabel Carlo
    161 Carlo
  12. Kaitlin Marie Woo
    101 Woo
  13. Chung-Han   Lee
    157 Lee
  14. Devyn Taylor Coskey
    16 Coskey
  15. Brandon John Manley
    24 Manley