Design and synthesis of a library of C8-substituted sulfamidoadenosines to probe bacterial permeability Journal Article


Authors: Yildirim, O.; Barman, D.; Chung, M.; Stone, S.; Geißen, R.; Boby, M. L.; Sherborne, B. S.; Tan, D. S.
Article Title: Design and synthesis of a library of C8-substituted sulfamidoadenosines to probe bacterial permeability
Abstract: Gram-negative bacteria pose a major challenge in antibiotic drug discovery because their cell envelope presents a permeability barrier that affords high intrinsic resistance to small-molecule drugs. The identification of correlations between chemical structure and Gram-negative permeability would thus enable development of predictive tools to facilitate antibiotic discovery. Toward this end, have advanced a library design paradigm in which various chemical scaffolds are functionalized at different regioisomeric positions using a uniform reagent set. This design enables decoupling of scaffold, regiochemistry, and substituent effects upon Gram-negative permeability of these molecules. Building upon our recent synthesis of a library of C2-substituted sulfamidoadenosines, we have now developed an efficient synthetic route to an analogous library of regioisomeric C8-substituted congeners. The C8 library samples a region of antibiotic-relevant chemical space that is similar to that addressed by the C2 library, but distinct from that sampled by a library of analogously substituted oxazolidinones. Selected molecules were tested for accumulation in Escherichia coli in a pilot analysis, setting the stage for full comparative evaluation of these libraries in the future. © 2024 Elsevier Ltd
Keywords: drug discovery; antibiotic resistance; gram-negative bacteria; diversity-oriented synthesis; nucleoside analogue
Journal Title: Bioorganic & Medicinal Chemistry Letters
Volume: 110
ISSN: 0960-894X
Publisher: Pergamon-Elsevier Science Ltd  
Date Published: 2024-09-15
Start Page: 129844
Language: English
DOI: 10.1016/j.bmcl.2024.129844
PUBMED: 38851357
PROVIDER: scopus
PMCID: PMC11361631
DOI/URL:
Notes: The MSK Cancer Center Support Grant (P30 CA008748) is acknowledged in the PDF -- Corresponding authors is MSK author: Derek S. Tan -- Source: Scopus
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MSK Authors
  1. Derek S Tan
    92 Tan
  2. Melissa Lynn Boby
    6 Boby
  3. Samantha Stone
    3 Stone
  4. Mia Connolly Chung
    2 Chung
  5. Dipti N. Barman
    1 Barman