Virulence and genomic diversity among clinical isolates of ST1 (BI/NAP1/027) clostridioides difficile Journal Article


Authors: Dong, Q.; Lin, H.; Allen, M. M.; Garneau, J. R.; Sia, J. K.; Smith, R. C.; Haro, F.; McMillen, T.; Pope, R. L.; Metcalfe, C.; Burgo, V.; Woodson, C.; Dylla, N.; Kohout, C.; Sundararajan, A.; Snitkin, E. S.; Young, V. B.; Fortier, L. C.; Kamboj, M.; Pamer, E. G.
Article Title: Virulence and genomic diversity among clinical isolates of ST1 (BI/NAP1/027) clostridioides difficile
Abstract: Clostridioides difficile produces toxins that damage the colonic epithelium, causing colitis. Variation in disease severity is poorly understood and has been attributed to host factors and virulence differences between C. difficile strains. We test 23 epidemic ST1 C. difficile clinical isolates for their virulence in mice. All isolates encode a complete Tcd pathogenicity locus and achieve similar colonization densities. However, disease severity varies from lethal to avirulent infections. Genomic analysis of avirulent isolates reveals a 69-bp deletion in the cdtR gene, which encodes a response regulator for binary toxin expression. Deleting the 69-bp sequence in virulent R20291 strain renders it avirulent in mice with reduced toxin gene transcription. Our study demonstrates that a natural deletion within cdtR attenuates virulence in the epidemic ST1 C. difficile isolates without reducing colonization and persistence. Distinguishing strains on the basis of cdtR may enhance the specificity of diagnostic tests for C. difficile colitis. © 2023 The Author(s)
Keywords: controlled study; gene mutation; gene deletion; nonhuman; mouse; phenotype; animal tissue; gene expression; animal experiment; animal model; genetic variability; genetic transcription; in vivo study; bacterial strain; bacterial virulence; genomics; bacterium isolate; c57bl 6 mouse; bacterial colonization; bacterial gene; virulence; male; female; article; toxins; clinical isolates; prophage; c. difficile; clostridioides difficile; binary toxin; cdt; cp: microbiology; rt027; st1; cdta gene; cdtb gene; cdtr gene
Journal Title: Cell Reports
Volume: 42
Issue: 8
ISSN: 2211-1247
Publisher: Cell Press  
Date Published: 2023-08-29
Start Page: 112861
Language: English
DOI: 10.1016/j.celrep.2023.112861
PUBMED: 37523264
PROVIDER: scopus
PMCID: PMC10627504
DOI/URL:
Notes: Article -- Source: Scopus
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  1. Mini Kamboj
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  2. Jonathan Kevin Sia
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