Analysis of donor pancreata defines the transcriptomic signature and microenvironment of early neoplastic lesions Journal Article


Authors: Carpenter, E. S.; Elhossiny, A. M.; Kadiyala, P.; Li, J.; McGue, J.; Griffith, B. D.; Zhang, Y.; Edwards, J.; Nelson, S.; Lima, F.; Donahue, K. L.; Du, W.; Bischoff, A. C.; Alomari, D.; Watkoske, H. R.; Mattea, M.; The, S.; Espinoza, C. E.; Barrett, M.; Sonnenday, C. J.; Olden, N.; Chen, C. T.; Peterson, N.; Gunchick, V.; Sahai, V.; Rao, A.; Bednar, F.; Shi, J.; Frankel, T. L.; di Magliano, M. P.
Article Title: Analysis of donor pancreata defines the transcriptomic signature and microenvironment of early neoplastic lesions
Abstract: The adult healthy human pancreas has been poorly studied given the lack of indica-tion to obtain tissue from the pancreas in the absence of disease and rapid post-mortem degradation. We obtained pancreata from brain dead donors, thus avoiding any warm ischemia time. The 30 donors were diverse in age and race and had no known pancreas disease. Histopathologic analysis of the samples revealed pancreatic intraepithelial neoplasia (PanIN) lesions in most individu-als irrespective of age. Using a combination of multiplex IHC, single-cell RNA sequencing, and spatial transcriptomics, we provide the first-ever characterization of the unique microenvironment of the adult human pancreas and of sporadic PanIN lesions. We compared healthy pancreata to pancreatic cancer and peritumoral tissue and observed distinct transcriptomic signatures in fi broblasts and, to a lesser extent, macrophages. PanIN epithelial cells from healthy pancreata were remarkably transcriptionally similar to cancer cells, suggesting that neoplastic pathways are initiated early in tumorigenesis. SIGNIFICANCE: Precursor lesions to pancreatic cancer are poorly characterized. We analyzed donor pancreata and discovered that precursor lesions are detected at a much higher rate than the incidence of pancreatic cancer, setting the stage for efforts to elucidate the microenvironmental and cell -intrin-sic factors that restrain or, conversely, promote malignant progression.
Keywords: adenocarcinoma; tumor; mutations; expression; ductal; intraepithelial neoplasia; subtypes; egf receptor; oncogenic kras; cancer-associated fibroblasts; occurs late
Journal Title: Cancer Discovery
Volume: 13
Issue: 6
ISSN: 2159-8274
Publisher: American Association for Cancer Research  
Date Published: 2023-06-01
Start Page: 1324
End Page: 1345
Language: English
ACCESSION: WOS:001012119300001
DOI: 10.1158/2159-8290.Cd-23-0013
PROVIDER: wos
PMCID: PMC10236159
PUBMED: 37021392
Notes: Article -- Source: Wos
Altmetric
Citation Impact
BMJ Impact Analytics
MSK Authors
  1. Chin-Tung Chen
    63 Chen