Evaluating the association between latent classes and competing risks outcomes with multiphenotype data Journal Article


Authors: Fei, T.; Hanfelt, J.; Peng, L.
Article Title: Evaluating the association between latent classes and competing risks outcomes with multiphenotype data
Abstract: Latent class analysis is an intuitive tool to characterize disease phenotype heterogeneity. With data more frequently collected on multiple phenotypes in chronic disease studies, it is of rising interest to investigate how the latent classes embedded in one phenotype are related to another phenotype. Motivated by a cohort with mild cognitive impairment (MCI) from the Uniform Data Set (UDS), we propose and study a time-dependent structural model to evaluate the association between latent classes and competing risk outcomes that are subject to missing failure types. We develop a two-step estimation procedure which circumvents latent class membership assignment and is rigorously justified in terms of accounting for the uncertainty in classifying latent classes. The new method also properly addresses the realistic complications for competing risks outcomes, including random censoring and missing failure types. The asymptotic properties of the resulting estimator are established. Given that the standard bootstrapping inference is not feasible in the current problem setting, we develop analytical inference procedures, which are easy to implement. Our simulation studies demonstrate the advantages of the proposed method over benchmark approaches. We present an application to the MCI data from UDS, which uncovers a detailed picture of the neuropathological relevance of the baseline MCI subgroups. © 2021 The International Biometric Society.
Keywords: phenotype; computer simulation; cognitive defect; parameter estimation; data; numerical model; bootstrapping; cognitive dysfunction; estimating equation; competing risks; humans; human; latent class analysis; structural model; cumulative incidence function
Journal Title: Biometrics
Volume: 79
Issue: 1
ISSN: 0006-341X
Publisher: Wiley Blackwell  
Date Published: 2023-03-01
Start Page: 488
End Page: 501
Language: English
DOI: 10.1111/biom.13563
PUBMED: 34532859
PROVIDER: scopus
PMCID: PMC8926941
DOI/URL:
Notes: Article -- Source: Scopus
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  1. Teng Fei
    40 Fei