SETD2 regulates chromatin accessibility and transcription to suppress lung tumorigenesis Journal Article


Authors: Xie, Y.; Sahin, M.; Wakamatsu, T.; Inoue-Yamauchi, A.; Zhao, W.; Han, S.; Nargund, A. M.; Yang, S.; Lyu, Y.; Hsieh, J. J.; Leslie, C. S.; Cheng, E. H.
Article Title: SETD2 regulates chromatin accessibility and transcription to suppress lung tumorigenesis
Abstract: SETD2, a H3K36 trimethyltransferase, is the most frequently mutated epigenetic modifier in lung adenocarcinoma, with a mutation frequency of approximately 9%. However, how SETD2 loss of function promotes tumorigenesis remains unclear. Using conditional Setd2-KO mice, we demonstrated that Setd2 deficiency accelerated the initiation of KrasG12D-driven lung tumorigenesis, increased tumor burden, and significantly reduced mouse survival. An integrated chromatin accessibility and transcriptome analysis revealed a potentially novel tumor suppressor model of SETD2 in which SETD2 loss activates intronic enhancers to drive oncogenic transcriptional output, including the KRAS transcriptional signature and PRC2-repressed targets, through regulation of chromatin accessibility and histone chaperone recruitment. Importantly, SETD2 loss sensitized KRAS-mutant lung cancer to inhibition of histone chaperones, the FACT complex, or transcriptional elongation both in vitro and in vivo. Overall, our studies not only provide insight into how SETD2 loss shapes the epigenetic and transcriptional landscape to promote tumorigenesis, but they also identify potential therapeutic strategies for SETD2 mutant cancers. Copyright: © 2023, Xie et al.
Keywords: genetics; mouse; animal; metabolism; animals; mice; lung neoplasms; carcinogenesis; cell transformation, neoplastic; lung tumor; cell transformation; chromatin; histone-lysine n-methyltransferase; lung; protein p21; proto-oncogene proteins p21(ras); histone lysine methyltransferase; setd2 protein, mouse
Journal Title: JCI Insight
Volume: 8
Issue: 4
ISSN: 2379-3708
Publisher: Amer Soc Clinical Investigation Inc  
Date Published: 2023-02-22
Start Page: e154120
Language: English
DOI: 10.1172/jci.insight.154120
PUBMED: 36810256
PROVIDER: scopus
PMCID: PMC9977508
DOI/URL:
Notes: Article MSK Cancer Center Support Grant (P30 CA008748) acknowledged in PDF -- MSK corresponding author is Emily Cheng -- Source: Scopus
Altmetric
Citation Impact
BMJ Impact Analytics
MSK Authors
  1. Emily H Cheng
    78 Cheng
  2. Christina Leslie
    191 Leslie
  3. Amrita Mohan Nargund
    12 Nargund
  4. Song   Han
    9 Han
  5. Yuchen Xie
    6 Xie
  6. Merve Sahin
    9 Sahin
  7. Shaoyuan Yang
    2 Yang
  8. Wanming Zhao
    1 Zhao