Regulation of neuroendocrine plasticity by the RNA-binding protein ZFP36L1 Journal Article


Authors: Chen, H. Y.; Durmaz, Y. T.; Li, Y.; Sabet, A. H.; Vajdi, A.; Denize, T.; Walton, E.; Laimon, Y. N.; Doench, J. G.; Mahadevan, N. R.; Losman, J. A.; Barbie, D. A.; Tolstorukov, M. Y.; Rudin, C. M.; Sen, T.; Signoretti, S.; Oser, M. G.
Article Title: Regulation of neuroendocrine plasticity by the RNA-binding protein ZFP36L1
Abstract: Some small cell lung cancers (SCLCs) are highly sensitive to inhibitors of the histone demethylase LSD1. LSD1 inhibitors are thought to induce their anti-proliferative effects by blocking neuroendocrine differentiation, but the mechanisms by which LSD1 controls the SCLC neuroendocrine phenotype are not well understood. To identify genes required for LSD1 inhibitor sensitivity in SCLC, we performed a positive selection genome-wide CRISPR/Cas9 loss of function screen and found that ZFP36L1, an mRNA-binding protein that destabilizes mRNAs, is required for LSD1 inhibitor sensitivity. LSD1 binds and represses ZFP36L1 and upon LSD1 inhibition, ZFP36L1 expression is restored, which is sufficient to block the SCLC neuroendocrine differentiation phenotype and induce a non-neuroendocrine “inflammatory” phenotype. Mechanistically, ZFP36L1 binds and destabilizes SOX2 and INSM1 mRNAs, two transcription factors that are required for SCLC neuroendocrine differentiation. This work identifies ZFP36L1 as an LSD1 target gene that controls the SCLC neuroendocrine phenotype and demonstrates that modulating mRNA stability of lineage transcription factors controls neuroendocrine to non-neuroendocrine plasticity. © 2022, The Author(s).
Keywords: genetics; phenotype; metabolism; gene; gene expression; lung neoplasms; protein; transcription factor; inhibitor; transcription factors; lung tumor; rna binding protein; rna-binding proteins; repressor protein; repressor proteins; differentiation; small cell lung cancer; small cell lung carcinoma; inhibition; plasticity; histone demethylase; histone demethylases; humans; human; insm1 protein, human; butyrate response factor 1; zfp36l1 protein, human
Journal Title: Nature Communications
Volume: 13
ISSN: 2041-1723
Publisher: Nature Publishing Group  
Date Published: 2022-08-25
Start Page: 4998
Language: English
DOI: 10.1038/s41467-022-31998-7
PUBMED: 36008402
PROVIDER: scopus
PMCID: PMC9411550
DOI/URL:
Notes: Article -- Export Date: 3 October 2022 -- Source: Scopus
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  1. Charles Rudin
    489 Rudin