Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity Journal Article


Authors: Thomson, E. C.; Rosen, L. E.; Shepherd, J. G.; Spreafico, R.; da Silva Filipe, A.; Wojcechowskyj, J. A.; Davis, C.; Piccoli, L.; Pascall, D. J.; Dillen, J.; Lytras, S.; Czudnochowski, N.; Shah, R.; Meury, M.; Jesudason, N.; De Marco, A.; Li, K.; Bassi, J.; O'Toole, A.; Pinto, D.; Colquhoun, R. M.; Culap, K.; Jackson, B.; Zatta, F.; Rambaut, A.; Jaconi, S.; Sreenu, V. B.; Nix, J.; Zhang, I.; Jarrett, R. F.; Glass, W. G.; Beltramello, M.; Nomikou, K.; Pizzuto, M.; Tong, L.; Cameroni, E.; Croll, T. I.; Johnson, N.; Di Iulio, J.; Wickenhagen, A.; Ceschi, A.; Harbison, A. M.; Mair, D.; Ferrari, P.; Smollett, K.; Sallusto, F.; Carmichael, S.; Garzoni, C.; Nichols, J.; Galli, M.; Hughes, J.; Riva, A.; Ho, A.; Schiuma, M.; Semple, M. G.; Openshaw, P. J. M.; Fadda, E.; Baillie, J. K.; Chodera, J. D.; ISARIC4C Investigators; COVID-19 Genomics UK (COG-UK)Consortium; Rihn, S. J.; Lycett, S. J.; Virgin, H. W.; Telenti, A.; Corti, D.; Robertson, D. L.; Snell, G.
Article Title: Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity
Abstract: SARS-CoV-2 canmutate and evade immunity, with consequences for efficacy of emerging vaccines and antibody therapeutics. Here, we demonstrate that the immunodominant SARS-CoV-2 spike (S) receptor binding motif (RBM) is a highly variable region of S and provide epidemiological, clinical, and molecular characterization of a prevalent, sentinel RBM mutation, N439K. We demonstrate N439K S protein has enhanced binding affinity to the hACE2 receptor, and N439K viruses have similar in vitro replication fitness and cause infections with similar clinical outcomes as compared to wild type. We show the N439K mutation confers resistance against several neutralizing monoclonal antibodies, including one authorized for emergency use by the US Food and Drug Administration (FDA), and reduces the activity of some polyclonal sera from persons recovered from infection. Immune evasion mutations that maintain virulence and fitness such as N439K can emerge within SARS-CoV-2 S, highlighting the need for ongoing molecular surveillance to guide development and usage of vaccines and therapeutics.
Journal Title: Cell
Volume: 184
Issue: 5
ISSN: 0092-8674
Publisher: Cell Press  
Date Published: 2021-03-04
Start Page: 1171
End Page: 1187.e20
Language: English
ACCESSION: WOS:000629635700009
DOI: 10.1016/j.cell.2021.01.037
PROVIDER: wos
PMCID: PMC7843029
PUBMED: 33621484
Notes: Article -- Source: Wos
Altmetric
Citation Impact
BMJ Impact Analytics
MSK Authors
  1. John Damon Chodera
    118 Chodera
  2. William Glass
    5 Glass
  3. Ivy Zhang
    7 Zhang