AlignmentViewer: Sequence analysis of large protein families Journal Article
| Authors: | Reguant, R.; Antipin, Y.; Sheridan, R.; Dallago, C.; Diamantoukos, D.; Luna, A.; Sander, C.; Gauthier, N. P. |
| Article Title: | AlignmentViewer: Sequence analysis of large protein families |
| Abstract: | AlignmentViewer is a web-based tool to view and analyze multiple sequence alignments of protein families. The particular strengths of AlignmentViewer include flexible visualization at different scales as well as analysis of conservation patterns and of the distribution of proteins in sequence space. The tool is directly accessible in web browsers without the need for software installation. It can handle protein families with tens of thousands of sequences and is particularly suitable for evolutionary coupling analysis, e.g. via EVcouplings.org. © 2020 Reguant R et al. |
| Keywords: | sequence analysis; sequence alignment; protein family; tool; web browser; article; web-based; alignment viewer; javascript; msa; protein alignments |
| Journal Title: | F1000Research |
| Volume: | 9 |
| ISSN: | 2046-1402 |
| Publisher: | Science Navigation Group |
| Date Published: | 2020-10-15 |
| Start Page: | 213 |
| Language: | English |
| DOI: | 10.12688/f1000research.22242.2 |
| PUBMED: | 33123346 |
| PROVIDER: | scopus |
| PMCID: | PMC7570326 |
| DOI/URL: | |
| Notes: | Article -- Export Date: 1 December 2020 -- Source: Scopus |
