A pan-cancer analysis of PBAF complex mutations and their association with immunotherapy response Journal Article


Authors: Hakimi, A. A.; Attalla, K.; DiNatale, R. G.; Ostrovnaya, I.; Flynn, J.; Blum, K. A.; Ged, Y.; Hoen, D.; Kendall, S. M.; Reznik, E.; Bowman, A.; Hwee, J.; Fong, C. J.; Kuo, F.; Voss, M. H.; Chan, T. A.; Motzer, R. J.
Article Title: A pan-cancer analysis of PBAF complex mutations and their association with immunotherapy response
Abstract: There is conflicting data regarding the role of PBAF complex mutations and response to immune checkpoint blockade (ICB) therapy in clear cell renal cell carcinoma (ccRCC) and other solid tumors. We assess the prevalence of PBAF complex mutations from two large cohorts including the pan-cancer TCGA project (n = 10,359) and the MSK-IMPACT pan-cancer immunotherapy cohort (n = 3700). Across both cohorts, PBAF complex mutations, predominantly PBRM1 mutations, are most common in ccRCC. In multivariate models of ccRCC patients treated with ICB (n = 189), loss-of-function (LOF) mutations in PBRM1 are not associated with overall survival (OS) (HR = 1.24, p = 0.47) or time to treatment failure (HR = 0.85, p = 0.44). In a series of 11 solid tumors (n = 2936), LOF mutations are not associated with improved OS in a stratified multivariate model (HR = 0.9, p = 0.7). In a current series of solid tumors treated with ICB, we are unable to demonstrate favorable response to ICB in patients with PBAF complex mutations. © 2020, The Author(s).
Keywords: survival; mutation; immune response; tumor; cancer
Journal Title: Nature Communications
Volume: 11
ISSN: 2041-1723
Publisher: Nature Publishing Group  
Date Published: 2020-08-20
Start Page: 4168
Language: English
DOI: 10.1038/s41467-020-17965-0
PUBMED: 32820162
PROVIDER: scopus
PMCID: PMC7441387
DOI/URL:
Notes: Article -- Source: Scopus
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MSK Authors
  1. Timothy Chan
    317 Chan
  2. Robert Motzer
    1243 Motzer
  3. Martin Henner Voss
    288 Voss
  4. Abraham Ari Hakimi
    324 Hakimi
  5. Eduard Reznik
    103 Reznik
  6. Fengshen Kuo
    80 Kuo
  7. Jessica Flynn
    182 Flynn
  8. Anita S Bowman
    44 Bowman
  9. Yasser Mohamed Ali Ged
    19 Ged
  10. Kyle Blum
    38 Blum
  11. Christopher Joseph Fong
    42 Fong
  12. Douglas Robert Hoen
    10 Hoen
  13. Jason Hwee
    4 Hwee
  14. Kyrollis Attalla
    19 Attalla