Oncogenic genomic alterations, clinical phenotypes, and outcomes in metastatic castration-sensitive prostate cancer Journal Article


Authors: Stopsack, K. H.; Nandakumar, S.; Wibmer, A. G.; Haywood, S.; Weg, E. S.; Barnett, E. S.; Kim, C. J.; Carbone, E. A.; Vasselman, S. E.; Nguyen, B.; Hullings, M. A.; Scher, H. I.; Morris, M. J.; Solit, D. B.; Schultz, N.; Kantoff, P. W.; Abida, W.
Article Title: Oncogenic genomic alterations, clinical phenotypes, and outcomes in metastatic castration-sensitive prostate cancer
Abstract: PURPOSE: The genomic underpinning of clinical phenotypes and outcomes in metastatic castration-sensitive prostate cancer is unclear. EXPERIMENTAL DESIGN: In patients with metastatic castration-sensitive prostate cancer at a tertiary referral center, clinical-grade targeted tumor sequencing was performed to quantify tumor DNA copy number alterations and alterations in predefined oncogenic signaling pathways. Disease volume was classified as high volume (≥4 bone metastases or visceral metastases) versus low volume. RESULTS: Among 424 patients (88% white), 213 (50%) had high-volume disease and 211 (50%) had low-volume disease, 275 (65%) had de novo metastatic disease, and 149 (35%) had metastatic recurrence of nonmetastatic disease. Rates of castration resistance [adjusted hazard ratio, 1.84; 95% confidence interval (CI), 1.40-2.41] and death (adjusted hazard ratio, 3.71; 95% CI, 2.28-6.02) were higher in high-volume disease. Tumors from high-volume disease had more copy number alterations. The NOTCH, cell cycle, and epigenetic modifier pathways were the highest-ranking pathways enriched in high-volume disease. De novo metastatic disease differed from metastatic recurrences in the prevalence of CDK12 alterations but had similar prognosis. Rates of castration resistance differed 1.5-fold to 5-fold according to alterations in AR, SPOP (inverse), and TP53, and the cell cycle, WNT (inverse), and MYC pathways, adjusting for disease volume and other genomic pathways. Overall survival rates differed 2-fold to 4-fold according to AR, SPOP (inverse), WNT (inverse), and cell-cycle alterations. PI3K pathway alterations were not associated with prognosis once adjusted for other factors. CONCLUSIONS: This study identified genomic features associated with prognosis in metastatic castration-sensitive disease that may aid in molecular classification and treatment selection. ©2020 American Association for Cancer Research.
Journal Title: Clinical Cancer Research
Volume: 26
Issue: 13
ISSN: 1078-0432
Publisher: American Association for Cancer Research  
Date Published: 2020-07-01
Start Page: 3230
End Page: 3238
Language: English
DOI: 10.1158/1078-0432.Ccr-20-0168
PUBMED: 32220891
PROVIDER: scopus
PMCID: PMC7334067
DOI/URL:
Notes: Article -- Export Date: 3 August 2020 -- Source: Scopus
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MSK Authors
  1. Michael Morris
    361 Morris
  2. David Solit
    569 Solit
  3. Howard Scher
    989 Scher
  4. Wassim Abida
    79 Abida
  5. Nikolaus D Schultz
    283 Schultz
  6. Andreas Georg Wibmer
    26 Wibmer
  7. Emily Steinberger Weg
    10 Weg
  8. Philip Wayne Kantoff
    139 Kantoff
  9. Ethan Sean Barnett
    12 Barnett
  10. Emily Ann Carbone
    10 Carbone
  11. Bastien Nguyen
    5 Nguyen
  12. Chloe Jinsol Kim
    1 Kim