Technical note: 3D localization of lung tumors on cone beam CT projections via a convolutional recurrent neural network Journal Article


Authors: Wang, C.; Hunt, M.; Zhang, L.; Rimner, A.; Yorke, E.; Lovelock, M.; Li, X.; Li, T.; Mageras, G.; Zhang, P.
Article Title: Technical note: 3D localization of lung tumors on cone beam CT projections via a convolutional recurrent neural network
Abstract: Purpose: To design a convolutional recurrent neural network (CRNN) that calculates three-dimensional (3D) positions of lung tumors from continuously acquired cone beam computed tomography (CBCT) projections, and facilitates the sorting and reconstruction of 4D-CBCT images. Method: Under an IRB-approved clinical lung protocol, kilovoltage (kV) projections of the setup CBCT were collected in free-breathing. Concurrently, an electromagnetic signal-guided system recorded motion traces of three transponders implanted in or near the tumor. Convolutional recurrent neural network was designed to utilize a convolutional neural network (CNN) for extracting relevant features of the kV projections around the tumor, followed by a recurrent neural network for analyzing the temporal patterns of the moving features. Convolutional recurrent neural network was trained on the simultaneously collected kV projections and motion traces, subsequently utilized to calculate motion traces solely based on the continuous feed of kV projections. To enhance performance, CRNN was also facilitated by frequent calibrations (e.g., at 10° gantry rotation intervals) derived from cross-correlation-based registrations between kV projections and templates created from the planning 4DCT. Convolutional recurrent neural network was validated on a leave-one-out strategy using data from 11 lung patients, including 5500 kV images. The root-mean-square error between the CRNN and motion traces was calculated to evaluate the localization accuracy. Result: Three-dimensional displacement around the simulation position shown in the Calypso traces was 3.4 ± 1.7 mm. Using motion traces as ground truth, the 3D localization error of CRNN with calibrations was 1.3 ± 1.4 mm. CRNN had a success rate of 86 ± 8% in determining whether the motion was within a 3D displacement window of 2 mm. The latency was 20 ms when CRNN ran on a high-performance computer cluster. Conclusions: CRNN is able to provide accurate localization of lung tumors with aid from frequent recalibrations using the conventional cross-correlation-based registration approach, and has the potential to remove reliance on the implanted fiducials. © 2020 American Association of Physicists in Medicine
Keywords: clinical article; controlled study; cancer patient; cancer radiotherapy; diagnostic accuracy; tumor localization; image analysis; calibration; lung cancer; lung tumor; computer simulation; motion; image reconstruction; electric potential; measurement error; image registration; cone beam computed tomography; latent period; diagnostic test accuracy study; cone beam ct; feature extraction; intrafractional motion management; three-dimensional imaging; four dimensional computed tomography; human; article; deep learning; convolutional neural network; recurrent neural network; cross correlation; electromagnetism; root mean square error
Journal Title: Medical Physics
Volume: 47
Issue: 3
ISSN: 0094-2405
Publisher: American Association of Physicists in Medicine  
Date Published: 2020-03-01
Start Page: 1161
End Page: 1166
Language: English
DOI: 10.1002/mp.14007
PUBMED: 31899807
PROVIDER: scopus
PMCID: PMC7067648
DOI/URL:
Notes: Article -- Export Date: 1 April 2020 -- Source: Scopus
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MSK Authors
  1. Andreas Rimner
    527 Rimner
  2. Pengpeng Zhang
    179 Zhang
  3. Gikas S Mageras
    277 Mageras
  4. Ellen D Yorke
    451 Yorke
  5. Dale M Lovelock
    183 Lovelock
  6. Margie A Hunt
    287 Hunt
  7. Xiang   Li
    72 Li
  8. Tianfang Li
    48 Li
  9. Lei Zhang
    32 Zhang
  10. Chuang Wang
    9 Wang