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  1. "BMC Bioinformatics"
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  1. Journal Article (28)
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  1. Sloan Kettering Institute Faculty (11)
  2. Sloan Kettering Institute Postdocs (11)
  3. GSK Faculty (10)
  4. Center for Molecular Imaging and Biotechnology (5)
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Publications
  1. BMC Bioinformatics (30)

Results (30)


Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • A Dirichlet-multinomial mixed model for determining differential abundance of mutational signatures
    Journal Article

    Morrill Gavarró, L.; Couturier, D. L.; Markowetz, F.
    BMC Bioinformatics (2025)

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  • Predicting tumour content of liquid biopsies from cell-free DNA
    Journal Article

    Cardner, M.; Marass, F.; Gedvilaite, E.; Yang, J. L.; Tsui, D. W. Y.; Beerenwinkel, N.
    BMC Bioinformatics (2023)

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  • Empirical evaluation of language modeling to ascertain cancer outcomes from clinical text reports
    Journal Article

    Elmarakeby, H. A.; Trukhanov, P. S.; Arroyo, V. M.; Riaz, I. B.; Schrag, D.; Van Allen, E. M.; Kehl, K. L.
    BMC Bioinformatics (2023)

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  • The maximum entropy principle for compositional data
    Journal Article

    Weistuch, C.; Zhu, J.; Deasy, J. O.; Tannenbaum, A. R.
    BMC Bioinformatics (2022)

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  • Isabl Platform, a digital biobank for processing multimodal patient data
    Journal Article

    Medina-Martínez, J. S.; Arango-Ossa, J. E.; Levine, M. F.; Zhou, Y.; Gundem, G.; Kung, A. L.; Papaemmanuil, E.
    BMC Bioinformatics (2020)

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  • An EM algorithm to improve the estimation of the probability of clonal relatedness of pairs of tumors in cancer patients
    Journal Article

    Mauguen, A.; Seshan, V. E.; Ostrovnaya, I.; Begg, C. B.
    BMC Bioinformatics (2019)

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  • AceTree: A major update and case study in the long term maintenance of open-source scientific software
    Journal Article

    Katzman, B.; Tang, D.; Santella, A.; Bao, Z.
    BMC Bioinformatics (2018)

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  • ProteoModlR for functional proteomic analysis
    Journal Article

    Cifani, P.; Shakiba, M.; Chhangawala, S.; Kentsis, A.
    BMC Bioinformatics (2017)

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  • Distribution Analyzer, a methodology for identifying and clustering outlier conditions from single-cell distributions, and its application to a Nanog reporter RNAi screen
    Journal Article

    Gingold, J. A.; Coakley, E. S.; Su, J.; Lee, D. F.; Lau, Z.; Zhou, H.; Felsenfeld, D. P.; Schaniel, C.; Lemischka, I. R.
    BMC Bioinformatics (2015)

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  • WormGUIDES: An interactive single cell developmental atlas and tool for collaborative multidimensional data exploration
    Journal Article

    Santella, A.; Catena, R.; Kovacevic, I.; Shah, P.; Yu, Z.; Marquina-Solis, J.; Kumar, A.; Wu, Y. C.; Schaff, J.; Colon-Ramos, D.; more...
    BMC Bioinformatics (2015)

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