Biomed Central Ltd

SHERPA: Unknown

People

  1. Bao
    Bao
  2. Santella
    Santella
  3. Deasy
    Deasy
  4. Leslie
    Leslie
  5. Ostrovnaya
    Ostrovnaya
  6. Arango Ossa
    Arango Ossa
  7. Begg
    Begg
  8. Gedvilaite
    Gedvilaite
  9. Gross
    Gross
  10. Gundem
    Gundem

Groups

  1. Sloan Kettering Institute Postdocs (11)
  2. GSK Faculty (10)
  3. Sloan Kettering Institute Faculty (9)
  4. Center for Molecular Imaging and Biotechnology (CMIB) (5)
  5. Developmental Biology Program Faculty (4)
  6. Epidemiology and Biostatistics (4)
  7. Biostatistics Service (3)
  8. Center for Hematologic Malignancies (3)
  9. Computational and Structural Biology Program Faculty (3)
  10. Tow Center for Developmental Oncology (TCDO) (3)
Search Within
  1. "BMC Bioinformatics"
Formats
  1. Journal Article (28)
  2. Meeting Abstract (2)
Groups
  1. Sloan Kettering Institute Postdocs (11)
  2. GSK Faculty (10)
  3. Sloan Kettering Institute Faculty (9)
  4. Center for Molecular Imaging and Biotechnology (CMIB) (5)
  5. Developmental Biology Program Faculty (4)
  6. Epidemiology and Biostatistics (4)

More Groups

People
  1. Anthony Santella (4)
  2. Zhirong Bao (4)
  3. Chris Sander (2)
  4. Christina Leslie (2)
  5. Ethan Cerami (2)
  6. Gunnar Ratsch (2)

More People

Years
  1. 2025 (1)
  2. 2023 (2)
  3. 2022 (1)
  4. 2020 (1)
  5. 2019 (1)
  6. 2018 (1)

More Years

Publications
  1. BMC Bioinformatics (30)

Results (30)


Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • A Dirichlet-multinomial mixed model for determining differential abundance of mutational signatures
    Journal Article

    Morrill Gavarró, L.; Couturier, D. L.; Markowetz, F.
    BMC Bioinformatics (2025)

    Fulltext@MSK | Save
  • Predicting tumour content of liquid biopsies from cell-free DNA
    Journal Article

    Cardner, M.; Marass, F.; Gedvilaite, E.; Yang, J. L.; Tsui, D. W. Y.; Beerenwinkel, N.
    BMC Bioinformatics (2023)

    Fulltext@MSK | Save
  • Empirical evaluation of language modeling to ascertain cancer outcomes from clinical text reports
    Journal Article

    Elmarakeby, H. A.; Trukhanov, P. S.; Arroyo, V. M.; Riaz, I. B.; Schrag, D.; Van Allen, E. M.; Kehl, K. L.
    BMC Bioinformatics (2023)

    Fulltext@MSK | Save
  • The maximum entropy principle for compositional data
    Journal Article

    Weistuch, C.; Zhu, J.; Deasy, J. O.; Tannenbaum, A. R.
    BMC Bioinformatics (2022)

    Fulltext@MSK | Save
  • Isabl Platform, a digital biobank for processing multimodal patient data
    Journal Article

    Medina-Martínez, J. S.; Arango-Ossa, J. E.; Levine, M. F.; Zhou, Y.; Gundem, G.; Kung, A. L.; Papaemmanuil, E.
    BMC Bioinformatics (2020)

    Fulltext@MSK | Save
  • An EM algorithm to improve the estimation of the probability of clonal relatedness of pairs of tumors in cancer patients
    Journal Article

    Mauguen, A.; Seshan, V. E.; Ostrovnaya, I.; Begg, C. B.
    BMC Bioinformatics (2019)

    Fulltext@MSK | Save
  • AceTree: A major update and case study in the long term maintenance of open-source scientific software
    Journal Article

    Katzman, B.; Tang, D.; Santella, A.; Bao, Z.
    BMC Bioinformatics (2018)

    Fulltext@MSK | Save
  • ProteoModlR for functional proteomic analysis
    Journal Article

    Cifani, P.; Shakiba, M.; Chhangawala, S.; Kentsis, A.
    BMC Bioinformatics (2017)

    Fulltext@MSK | Save
  • Distribution Analyzer, a methodology for identifying and clustering outlier conditions from single-cell distributions, and its application to a Nanog reporter RNAi screen
    Journal Article

    Gingold, J. A.; Coakley, E. S.; Su, J.; Lee, D. F.; Lau, Z.; Zhou, H.; Felsenfeld, D. P.; Schaniel, C.; Lemischka, I. R.
    BMC Bioinformatics (2015)

    Fulltext@MSK | Save
  • WormGUIDES: An interactive single cell developmental atlas and tool for collaborative multidimensional data exploration
    Journal Article

    Santella, A.; Catena, R.; Kovacevic, I.; Shah, P.; Yu, Z.; Marquina-Solis, J.; Kumar, A.; Wu, Y. C.; Schaff, J.; Colon-Ramos, D.; more...
    BMC Bioinformatics (2015)

    Fulltext@MSK | Save