Synapse - Anoop Balakrishnan Rema

Results (11)

Deep-learning model for tumor-type prediction using targeted clinical genomic sequencing data

Journal Article

Darmofal, M.; Suman, S.; Atwal, G.; Toomey, M.; Chen, J. F.; Chang, J. C.; Vakiani, E.; Varghese, A. M.; Balakrishnan Rema, A.; Syed, A.; more...
Cancer Discovery (2024)

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MPath Reporter: A scalable solution to integrate ancillary NGS-based clinical systems with medical informatics infrastructure

Meeting Abstract

Adhali, O.; Syed, A.; Balakrishnan, A.; Du, J.; Fuks, N.; Gurman, J.; Plate, L.; Schachter, J.; Schuessler, V.; Wang, J.; more...
Journal of Molecular Diagnostics (2022)

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Enhanced specificity of clinical high-sensitivity tumor mutation profiling in cell-free DNA via paired normal sequencing using MSK-ACCESS

Journal Article

Brannon, A. R.; Jayakumaran, G.; Diosdado, M.; Patel, J.; Razumova, A.; Hu, Y.; Meng, F.; Haque, M.; Sadowska, J.; Murphy, B. J.; more...
Nature Communications (2021)

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OncoTree: A cancer classification system for precision oncology

Journal Article

Kundra, R.; Zhang, H.; Sheridan, R.; Sirintrapun, S. J.; Wang, A.; Ochoa, A.; Wilson, M.; Gross, B.; Sun, Y.; Madupuri, R.; more...
JCO Clinical Cancer Informatics (2021)

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MPath Lab QC: A centralized assay agnostic approach to store, review, and finalize laboratory QC for NGS-based genomic clinical tests

Meeting Abstract

Agarunov, A.; Sadowska, J.; Balakrishnan, A.; Haque, M.; Hwee, J.; Borsu, L.; Arcila, M.; Benayed, R.; Syed, A.; Zehir, A.
Journal of Molecular Diagnostics (2020)

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MPath results PCR: An integrated approach to programmatically load, curate and report non-NGS germline results

Meeting Abstract

Murray, R.; Balakrishnan Rema, A.; Du, J.; Kavatkar, M.; Birsoy, O.; Somar, J.; Agarunov, A.; Haque, M.; Adhali, O.; Mandelker, D.; more...
Journal of Molecular Diagnostics (2020)

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Improved screening for cancer predisposition mutations in patients with advanced solid tumors enabled by tumor-normal sequencing

Meeting Abstract

Mandelker, D.; Zhang, L.; Kemel, Y.; Stadler, Z.; Joseph, V.; Zehir, A.; Pradhan, N.; Arnold, A. G.; Walsh, M.; Birsoy, O.; more...
Journal of Molecular Diagnostics (2017)

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Redesigning the molecular pathology clinical report for the next-generation genomic era: The MSKCC experience with the MSK-IMPACT assay

Meeting Abstract

Syed, A.; Madur, S. H.; Birnbaum, J.; Balakrishnan, A. R.; Chakravarty, D.; Gao, J.; Zhang, H.; Phillips, S. M.; Schultz, N. D.; Rudolph, J.; more...
Journal of Molecular Diagnostics (2017)

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Mutation detection in patients with advanced cancer by universal sequencing of cancer-related genes in tumor and normal DNA vs guideline-based germline testing

Journal Article

Mandelker, D.; Zhang, L.; Kemel, Y.; Stadler, Z. K.; Joseph, V.; Zehir, A.; Pradhan, N.; Arnold, A.; Walsh, M. F.; Li, Y.; more...
JAMA - Journal of the American Medical Association (2017)

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Mutational landscape of metastatic cancer revealed from prospective clinical sequencing of 10,000 patients

Journal Article

Zehir, A.; Benayed, R.; Shah, R. H.; Syed, A.; Middha, S.; Kim, H. R.; Srinivasan, P.; Gao, J.; Chakravarty, D.; Devlin, S. M.; more...
Nature Medicine (2017)

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