Biophysical Journal

Published by: Cell Press  

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  1. Chodera
    Chodera
  2. Luo
    Luo
  3. Pulido Sanchez
    Pulido Sanchez

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  1. Computational Biology Program Faculty (16)
  2. GSK Faculty (16)
  3. Sloan Kettering Institute Faculty (16)
  4. MSK Grad Students (9)
  5. Sloan Kettering Institute Postdocs (4)
  6. Alan and Sandra Gerry Metastasis and Tumor Ecosystems Center (3)
  7. Center for Hematologic Malignancies (3)
  8. Hematologic Malignancies Research (3)
  9. Molecular Pharmacology and Chemistry Program Faculty (3)
  10. Alumni (GSK) (1)
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  1. "John Chodera"
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  1. Meeting Abstract (16)
Groups
  1. Computational Biology Program Faculty (16)
  2. GSK Faculty (16)
  3. Sloan Kettering Institute Faculty (16)
  4. MSK Grad Students (9)
  5. Sloan Kettering Institute Postdocs (4)
  6. Alan and Sandra Gerry Metastasis and Tumor Ecosystems Center (3)

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  1. John Chodera (16)
  2. Kyle Beauchamp (4)
  3. Daniel Parton (3)
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  5. Minkui Luo (3)
  6. Rafal Wiewiora (3)

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  1. 2023 (3)
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  4. 2018 (1)
  5. 2017 (2)
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  1. Cell Press (16)

Results (16)


Citation style sort is year ascending, and then by author or title. Author ascending is default.
  • Fast, conformation-independent charges with graph convolutional networks
    Meeting Abstract

    Wang, L.; Boothroyd, S.; Horton, J. T.; Thompson, M. W.; Shirts, M. R.; Cole, D. J.; Chodera, J. D.; Mobley, D. L.
    Biophysical Journal (2023)

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  • Development and benchmarking of an open, self-consistent force field for proteins and small molecules from the open force field initiative
    Meeting Abstract

    Cavender, C. E.; Behara, P. K.; Boothroyd, S.; Dotson, D. L.; Horton, J. T.; Mitchell, J. A.; Pulido, I.; Thompson, M. W.; Wagner, J.; Wang, L.; more...
    Biophysical Journal (2023)

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  • Fast, conformation-independent charges with graph convolutional networks
    Meeting Abstract

    Wang, L.; Boothroyd, S.; Horton, J. T.; Thompson, M. W.; Shirts, M. R.; Cole, D. J.; Chodera, J. D.; Mobley, D. L.
    Biophysical Journal (2023)

    Fulltext@MSK | Save
  • Building an open, self-consistent force field for biopolymers and small molecules with the open force field initiative infrastructure
    Meeting Abstract

    Cavender, C. E.; Behara, P. K.; Boothroyd, S.; Dotson, D. L.; Pulido, I. J.; Thompson, M. W.; Wagner, J.; Wang, L.; Chodera, J. D.; Mobley, D. L.; more...
    Biophysical Journal (2022)

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  • Markov models of functional dynamics of histone lysine methyltransferases by millisecond-timescale molecular simulation and chemical probing
    Meeting Abstract

    Wiewiora, R. P.; Chen, S.; Luo, M.; Chodera, J. D.
    Biophysical Journal (2019)

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  • Conformational dynamics of histone methyltransferase SET8 probed by millisecond-timescale molecular dynamics, Markov state modeling and biochemical experiments
    Meeting Abstract

    Wiewiora, R. P.; Chen, S.; Luo, M.; Chodera, J. D.
    Biophysical Journal (2018)

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  • Conformational dynamics of histone lysine methyltransferases by millisecond-timescale molecular dynamics on Folding@home
    Meeting Abstract

    Wiewiora, R. P.; Chen, S.; Beauchamp, K.; Luo, M.; Chodera, J. D.
    Biophysical Journal (2017)

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  • Can we automatically detect biologically relevant order parameters in molecular simulation? Comparing long timescale simulations of multiple kinases
    Meeting Abstract

    Hanson, S. M.; Fass, J. H.; Chodera, J. D.
    Biophysical Journal (2017)

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  • Dissecting the contribution of kinase conformational reorganization energies to inhibitor selectivity
    Meeting Abstract

    Hanson, S. M.; Rodriguez, L.; Behr, J. M.; Rizzi, A.; Parton, D. L.; Beauchamp, K. A.; Fass, J. H.; Prinz, J. H.; Boyce, S. E.; Seeliger, M. A.; more...
    Biophysical Journal (2016)

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  • Simulating mTOR hyperactivating mutations to understand functionally significant structural rearrangements
    Meeting Abstract

    Albanese, S.; Xu, J.; Hsieh, J.; Chodera, J. D.
    Biophysical Journal (2016)

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    • Biophysical Journal – authorized name for:

    Name ISSN / ISBN Publisher
    Biophysical Journal 15420086 Biophysical Society
    Biophysical Journal 0006-3495 Biophysical Society
    Biophysical Journal 0006-3495 Elsevier Inc.
    Biophysical Journal 00063495 Unknown
    Biophysical Journal 0006-3495 Elsevier Inc.
    Biophysical Journal 0006-3495 Biophysical Society
    Biophysical journal 15420086 Unknown
    Biophysical Journal 00063495 Unknown
    Biophysical Journal 0006-3495 Cell Press
    Biophysical Journal 00063495 Biophysical Society
    Biophysical Journal 00063495 Biophysical Society
    Biophysical Journal 0006-3495 Unknown